YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|8978341, gi\|1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSPRPISVV STFASPSSTS DPTRKPLSLW PGMYHSPVTT ALWEARSKIF ESLLDPPKDA  60
   61 PPQSQLLTRT PSHSRTTIFY PFSTDFILRE QYRDPWNEVR IGILLEDLDA LAGTISVKHC 120
  121 SDDDSTTRPL LLVTASVHKI VLKKPICVDI DLKIVASVIW VGRSSIEIQL EVMQSELKDV 180
  181 KASSDSVALT ANFIFVARDS KTGKAAPINR LSPETEVEKL LFEEAEARNN LRKKKRGGDR 240
  241 REFDHGECKK LEAWLAEGRI FSDMPALADR NSILLKDTRL ENSLICQPQQ RNIHGRIFGG 300
  301 FLMHRAFELA FSTAYTFAGL VPYFLEVDHV DFLRPVDVGD FLRFKSCVLY TQLDKQDCPL 360
  361 INIEVVAHVT SPEIRSSEVS NTFYFKFTVR PEAKARNNGF KLRNVVPATE EEARHILERM 420
  421 DAEALKSSKQ QCVGTILQ

Type	Start	End	Confidence
Signal Peptide	1	20	0.90
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	438	0.99