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Protein Overview: HDG7_ARATH

General Information:
Name(s) found: HDG7_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Homeobox-leucine zipper protein HDG7 OS=Arabidopsis thaliana GN=HDG7 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 682 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA][ISS]
    Biological Process: regulation of transcription, DNA-dependent [IEA][ISS]
    regulation of transcription [IEA]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]
    sequence-specific DNA binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGDLEVDMS RGDFNPSFFL GKLKDDEFES RSLSDDSFDA MSGDEDKQEQ RPKKKKRKTK  60
   61 YHRHTSYQIQ ELESFFKECP HPNEKQRLEL GKKLTLESKQ IKFWFQNRRT QMKTQLERHE 120
  121 NVILKQENEK LRLENSFLKE SMRGSLCIDC GGAVIPGEVS FEQHQLRIEN AKLKEELDRI 180
  181 CALANRFIGG SISLEQPSNG GIGSQHLPIG HCVSGGTSLM FMDLAMEAMD ELLKLAELET 240
  241 SLWSSKSEKG SMNHFPGSRE TGLVLINSLA LVETLMDTNK WAEMFECIVA VASTLEVISN 300
  301 GSDGSRNGSI LLMQAEFQVM SPLVPIKQKK FLRYCKQHGD GLWAVVDVSY DINRGNENLK 360
  361 SYGGSKMFPS GCIIQDIGNG CSKVTWIEHS EYEESHTHSL YQPLLSSSVG LGATKWLATL 420
  421 QRQCESFTML LSSEDHTGLS HAGTKSILKL AQRMKLNFYS GITASCIHKW EKLLAENVGQ 480
  481 DTRILTRKSL EPSGIVLSAA TSLWLPVTQQ RLFEFLCDGK CRNQWDILSN GASMENTLLV 540
  541 PKGQQEGSCV SLLRAAGNDQ NESSMLILQE TWNDVSGALV VYAPVDIPSM NTVMSGGDSA 600
  601 YVALLPSGFS ILPDGSSSSS DQFDTDGGLV NQESKGCLLT VGFQILVNSL PTAKLNVESV 660
  661 ETVNNLIACT IHKIRAALRI PA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..106] PSI-BLAST 21.39794 Paired protein
    2 View Details [107..195] deduced N/A No confident structure predictions are available.
    3 View Details [196..431] FFAS03 3.48 No description for 2r55A was found.
    4 View Details [432..556] deduced N/A No confident structure predictions are available.
    5 View Details [557..682] MSA 2.059972 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle