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Protein Overview: gi|15232645, gi|...

General Information:
Name(s) found: gi|62319037 [NCBI NR]
gi|51969868 [NCBI NR]
gi|34146820 [NCBI NR]
gi|15232645 [NCBI NR]
gi|11994337 [NCBI NR]
Description(s) found:
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  • gi|62319037|dbj|BAD94164.1| putative lysophospholipase [Arabidopsis thaliana] [NCBI NR]
  • gi|51969868|dbj|BAD43626.1| putative lysophospholipase [Arabidopsis thaliana] [NCBI NR]
  • gi|34146820|gb|AAQ62418.1| At3g15650 [Arabidopsis thaliana] [NCBI NR]
  • gi|15232645|ref|NP_188186.1| phospholipase/carboxylesterase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|11994337|dbj|BAB02296.1| lysophospholipase-like protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9LW14) Lysophospholipase-like protein [athaliana3702.FASTAC.txt]
  • At3g15650 [Arabidopsis thaliana]gi|11994337|dbj|BAB02296.1| lysophospholipase-like protein [Arabidopsis thaliana]gi|51969868|dbj|BAD43626.1| putative lysophospholipase [Arabidopsis thaliana]gi|15232645|ref|NP_188186.1| phospholipase/carboxylesterase fa [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Phospholipase/carboxylesterase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | phospholipase/carboxylesterase family protein | chr3:5306013-5307771 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • lysophospholipase-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • carboxylic ester hydrolase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative lysophospholipase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At3g15650 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | alpha/beta-Hydrolases superfamily protein | chr3:5306006-5307764 FORWARD LENGTH=255 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At3g15650 OS=Arabidopsis thaliana GN=At3g15650 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of F4J010, Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana GN=At3g15650 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 255 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: carboxylesterase activity [ISS]
    hydrolase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYSRQSMGS GSRSTRGYEF GRTYVVRPKG KHQATIVWLH GLGDNGSSSS QLLESLPLPN  60
   61 IKWICPTAPS RPVSLLGGFP CTAWFDVGEI SEDLHDDIEG LDASAAHIAN LLSAEPTDVK 120
  121 VGIGGFSMGA AIALYSTTCY ALGRYGTGHA YTINLRATVG LSGWLPGWRS LRSKIESSNE 180
  181 VARRAASIPI LLAHGTSDDV VPYRFGEKSA HSLAMAGFRQ TMFKPYEGLG HYTVPKEMDE 240
  241 VVHWLVSRLG LEGSR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..255] PSI-BLAST 30.0 Acyl protein thioesterase 1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  2.24106351016868 bayes_pls_golite062009
  • catalytic activity
    		•  1.39629727416851 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  1.09488027320166 bayes_pls_golite062009
  • lipase activity
    		•  0.849473630399459 bayes_pls_golite062009
  • carboxylesterase activity
    		•  0.424330502936163 bayes_pls_golite062009
  • palmitoyl-(protein) hydrolase activity
    		•  0.277033874372149 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.53

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle