YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: AOC1_ARATH

General Information:
Name(s) found: AOC1_ARATH [Swiss-Prot]
Description(s) found:
Found 19 descriptions.
SHOW ALL
  • Allene oxide cyclase 1, chloroplastic OS=Arabidopsis thaliana GN=AOC1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 254 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    chloroplast envelope [IDA]
    chloroplast thylakoid membrane [IDA]
    Biological Process: jasmonic acid biosynthetic process [TAS]
    response to desiccation [IEP]
    Molecular Function: allene-oxide cyclase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSTISLQS ISMTTLNNLS YSKQFHRSSL LGFSKSFQNF GISSNGPGSS SPTSFTPKKK  60
   61 LTPTRALSQN LGNTENPRPS KVQELSVYEI NDLDRHSPKI LKNAFSFRFG LGDLVPFTNK 120
  121 LYTGDLKKRV GITAGLCVVI EHVPEKNGDR FEATYSFYFG DYGHLSVQGP YLTYEDSFLA 180
  181 ITGGAGIFEG AYGQVKLQQL VYPTKLFYTF YLKGLANDLP LELIGTPVPP SKDVEPAPEA 240
  241 KALKPSGVVS NFTN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..254] PSI-BLAST 97.522879 X-ray structure of allene oxide cyclase from arabidopsis thaliana AT3G25760


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle