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Protein Overview: MY113_ARATH

General Information:
Name(s) found: MY113_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75334151|sp|Q9FNV9.1|MY113_ARATH RecName: Full=Transcription factor MYB113; AltName: Full=Myb-related protein 113; Short=AtMYB113 [NCBI NR]
  • gi|41619154|gb|AAS10036.1| MYB transcription factor [Arabidopsis thaliana] [NCBI NR]
  • pir||A96689 hypothetical protein T27F4.12 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15219632|ref|NP_176811.1| MYB113 (myb domain protein 113); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|12324391|gb|AAG52158.1|AC020665_3 Myb-related transcription factor, putative; 55281-56251 [Arabidopsis thaliana] [NCBI NR]
  • gi|11641122|gb|AAG38380.1| putative transcription factor MYB113 [Arabidopsis thaliana] [NCBI NR]
  • Transcription factor MYB113 OS=Arabidopsis thaliana GN=MYB113 PE=1 SV=1 [Swiss-Prot]
  • (Q9FNV9) Putative transcription factor MYB113 (Myb-related transcription factor, putative) [athaliana3702.FASTAC.txt]
  • putative transcription factor MYB113 [Arabidopsis thaliana]gi|25404616|pir||A96689 hypothetical protein T27F4.12 [imported] - Arabidopsis thalianagi|12324391|gb|AAG52158.1| Myb-related transcription factor, putative; 55281-56251 [Arabidopsis thaliana]g [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Myb family transcription factor (MYB113) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: AtMYB113, MYB113 | MYB113 (myb domain protein 113); DNA binding / transcription factor | chr1:24757297-24758267 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Myb-related transcription factor, putative; 55281-56251 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • MYB113; DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • MYB transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative transcription factor MYB113 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: MYB113, AtMYB113 | myb domain protein 113 | chr1:24753634-24754604 FORWARD LENGTH=246 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 246 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to jasmonic acid stimulus [IEP]
    regulation of anthocyanin biosynthetic process [IMP]
    regulation of transcription [TAS]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGESPKGLRK GTWTTEEDIL LRQCIDKYGE GKWHRVPLRT GLNRCRKSCR LRWLNYLKPS  60
   61 IKRGKLCSDE VDLVLRLHKL LGNRWSLIAG RLPGRTANDV KNYWNTHLSK KHDERCCKTK 120
  121 MINKNITSHP TSSAQKIDVL KPRPRSFSDK NSCNDVNILP KVDVVPLHLG LNNNYVCESS 180
  181 ITCNKDEQKD KLININLLDG DNMWWESLLE ADVLGPEATE TAKGVTLPLD FEQIWARFDE 240
  241 ETLELN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..157] PSI-BLAST 35.69897 c-Myb, DNA-binding domain
    2 View Details [158..246] MSA 1.432996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle