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Protein Overview: CDA4_ARATH

General Information:
Name(s) found: CDA4_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
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  • Probable inactive cytidine deaminase 4 OS=Arabidopsis thaliana GN=CDA4 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 251 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: pyrimidine salvage [ISS]
    Molecular Function: zinc ion binding [IEA]
    catalytic activity [IEA]
    cytidine deaminase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQQLKFILT REEAASKGVS RPSDLVKLEE EAMILARAPI SGVQDAVLGL ASSDRIFLGV  60
   61 NVEFEGLPLH HSISAEQFLV ANLALNFEQE LHACLIPSRF YLESFEEDVP LLLVPQNNRL 120
  121 AHSDPFSAAE ICSNPEHCSH LKCRALTAAN KSNAQYSKCP SGVALICEGE VYGGWCIESA 180
  181 AYNLSLGPVQ AALVDFMARG EGKGFEMITG AVLVEMNDAK VSQEATARIL LKTIAPGCNF 240
  241 SVFRCHKTAE N

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..251] PSI-BLAST 55.69897 Two-domain cytidine deaminase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.177505784657 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle