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Protein Overview: PUM1_ARATH

General Information:
Name(s) found: PUM1_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Pumilio homolog 1 OS=Arabidopsis thaliana GN=APUM1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 968 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: NONE FOUND
    Molecular Function: RNA binding [IEA][ISS]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPELGRRPM HRGNEDSSFG DDYEKEIGVL LGEQQRRQVE ADELERELNL FRSGSAPPTV  60
   61 DGSVSAAGGL FSGGGGAPFL EFGGVNKGNG FGGDDEEFRK DPAYLSYYYA NMKLNPRLPP 120
  121 PLMSREDLRV AQRLKGSNNV LGGVGDRRKV NDNRSLFSMP PGFEGEKTGA SASEWDANGL 180
  181 IGLPGLGLGG KQKSFADIFQ ADMGHGHPVA QQPSRPASRN TFDENVDSNN NLSPSASQGI 240
  241 GAPSPYSYAA VLGSSLSRNG TPDPQAIARV PSPCLTPIGS GRMSSNDKRN TSNQSPFNGV 300
  301 TSGLNESSDL VNALSGLNLS CSVGLDDRSQ AEQDVEKVRN YMFGLQGGHN EVNQHEFPNK 360
  361 SDQAHKATGS LRNSQLRGPH GSAYNGGVGL ANPYQQLDSP NYCLNNYALN PAVASMMANQ 420
  421 LGNNNFAPMY DNVSALGFSG MDSRHHGRGF VSSGQNLSES RNLGRFSNRM MGGGAGLQSH 480
  481 MVDPMYNQYA DSLDLLNDPS MDRNFMGGSS YMDMLELQRA YLGAQKSQYG VPYKSGSPNS 540
  541 HSYYGSPTFG SNMSYPGSPL AHHGMPNSLM SPYSPMRRDE VNMRFPSATR NYSGGLMGSW 600
  601 HMDASFDEGF GSSMLEEFKS NKTRGFELSE IAGHVVEFSS DQYGSRFIQQ KLETATTDEK 660
  661 NMVYEEIMPQ ALVLMTDVFG NYVIQKFFEH GLPPQRRELA EKLFDHVLPL SLQMYGCRVI 720
  721 QKAIEVVDLD QKIKMVKELD GHVMRCVRDQ NGNHVVQKCI ECVPEENIEF IISTFFGHVV 780
  781 TLSTHPYGCR VIQRVLEHCH DPDTQSKVME EILSTVSMLA QDQYGNYVVQ HVLEHGKPDE 840
  841 RTVIIKELAG KIVQMSQQKF ASNVVEKCLT FGGPEERELL VNEMLGTTDE NEPLQAMMKD 900
  901 QFANYVVQKV LETCDDQQRE LILTRIKVHL TALKKYTYGK HVVARIEKLV AAGERRMALQ 960
  961 SLTQPQMA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..639] PSI-BLAST 23.09691 No description for 1y0fB was found.
    2 View Details [640..968] PSI-BLAST 147.0 Pumilio 1


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle