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Protein Overview: TLP9_ARATH

General Information:
Name(s) found: TLP9_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75266206|sp|Q9SQU1.1|TLP9_ARATH RecName: Full=Tubby-like F-box protein 9; Short=AtTLP9 [NCBI NR]
  • gi|6437549|gb|AAF08576.1|AC011623_9 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|33320971|gb|AAQ06243.1|AF487270_1 tubby-like protein TULP9 [Arabidopsis thaliana] [NCBI NR]
  • gi|15230707|ref|NP_187289.1| ATTLP9 (TUBBY-LIKE PROTEIN 9); phosphoric diester hydrolase/ protein binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|111074398|gb|ABH04572.1| At3g06380 [Arabidopsis thaliana] [NCBI NR]
  • Tubby-like F-box protein 9 OS=Arabidopsis thaliana GN=TULP9 PE=1 SV=1 [Swiss-Prot]
  • (Q9SQU1) F24P17.15 protein [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|33320971|gb|AAQ06243.1| tubby-like protein TULP9 [Arabidopsis thaliana]gi|15230707|ref|NP_187289.1| F-box family protein / tubby family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 F-box family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATTLP9 | ATTLP9 (TUBBY-LIKE PROTEIN 9); phosphoric diester hydrolase/ protein binding / transcription factor | chr3:1936390-1938034 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • phosphoric diester hydrolase/ transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • tubby-like protein TULP9 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At3g06380 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATTLP9, TLP9 | tubby-like protein 9 | chr3:1936384-1938028 FORWARD LENGTH=380 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 380 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: regulation of transcription [TAS]
    Molecular Function: transcription factor activity [ISS]
    protein binding [IPI]
    phosphoric diester hydrolase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFRSLLQEM RSRPHRVVHA AASTANSSDP FSWSELPEEL LREILIRVET VDGGDWPSRR  60
   61 NVVACAGVCR SWRILTKEIV AVPEFSSKLT FPISLKQSGP RDSLVQCFIK RNRNTQSYHL 120
  121 YLGLTTSLTD NGKFLLAASK LKRATCTDYI ISLRSDDISK RSNAYLGRMR SNFLGTKFTV 180
  181 FDGSQTGAAK MQKSRSSNFI KVSPRVPQGS YPIAHISYEL NVLGSRGPRR MRCIMDTIPM 240
  241 SIVESRGVVA STSISSFSSR SSPVFRSHSK PLRSNSASCS DSGNNLGDPP LVLSNKAPRW 300
  301 HEQLRCWCLN FHGRVTVASV KNFQLVAVSD CEAGQTSERI ILQFGKVGKD MFTMDYGYPI 360
  361 SAFQAFAICL SSFETRIACE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..98] FFAS03 1.58 No description for 2e31A was found.
    2 View Details [99..380] PSI-BLAST 107.0 Crystal Structure Analysis of the human Tub protein (isoform a) spanning residues 289 through 561


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.68

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle