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Protein Overview: PP239_ARATH

General Information:
Name(s) found: PP239_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS=Arabidopsis thaliana GN=PPR40 PE=3 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 659 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDA]
    Biological Process: response to oxidative stress [IMP]
    response to abscisic acid stimulus [IMP]
    response to salt stress [IMP]
    mitochondrial ATP synthesis coupled electron transport [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGFASSASR IATAAAASKS LNASTSVNPK LSKTLNSSGK PTNPLNQRYI SQVIERKDWF  60
   61 LILNQEFTTH RIGLNTRFVI SVLQNQDNPL HSLRFYLWVS NFDPVYAKDQ SLKSVLGNAL 120
  121 FRKGPLLLSM ELLKEIRDSG YRISDELMCV LIGSWGRLGL AKYCNDVFAQ ISFLGMKPST 180
  181 RLYNAVIDAL VKSNSLDLAY LKFQQMRSDG CKPDRFTYNI LIHGVCKKGV VDEAIRLVKQ 240
  241 MEQEGNRPNV FTYTILIDGF LIAGRVDEAL KQLEMMRVRK LNPNEATIRT FVHGIFRCLP 300
  301 PCKAFEVLVG FMEKDSNLQR VGYDAVLYCL SNNSMAKETG QFLRKIGERG YIPDSSTFNA 360
  361 AMSCLLKGHD LVETCRIFDG FVSRGVKPGF NGYLVLVQAL LNAQRFSEGD RYLKQMGVDG 420
  421 LLSSVYSYNA VIDCLCKARR IENAAMFLTE MQDRGISPNL VTFNTFLSGY SVRGDVKKVH 480
  481 GVLEKLLVHG FKPDVITFSL IINCLCRAKE IKDAFDCFKE MLEWGIEPNE ITYNILIRSC 540
  541 CSTGDTDRSV KLFAKMKENG LSPDLYAYNA TIQSFCKMRK VKKAEELLKT MLRIGLKPDN 600
  601 FTYSTLIKAL SESGRESEAR EMFSSIERHG CVPDSYTKRL VEELDLRKSG LSRETVSAS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..108] deduced N/A No confident structure predictions are available.
    2 View Details [109..578] PSI-BLAST 17.69897 No description for 2gw1A was found.
    3 View Details [579..659] PSI-BLAST 35.0 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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