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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PP239_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGFASSASR IATAAAASKS LNASTSVNPK LSKTLNSSGK PTNPLNQRYI SQVIERKDWF  60
   61 LILNQEFTTH RIGLNTRFVI SVLQNQDNPL HSLRFYLWVS NFDPVYAKDQ SLKSVLGNAL 120
  121 FRKGPLLLSM ELLKEIRDSG YRISDELMCV LIGSWGRLGL AKYCNDVFAQ ISFLGMKPST 180
  181 RLYNAVIDAL VKSNSLDLAY LKFQQMRSDG CKPDRFTYNI LIHGVCKKGV VDEAIRLVKQ 240
  241 MEQEGNRPNV FTYTILIDGF LIAGRVDEAL KQLEMMRVRK LNPNEATIRT FVHGIFRCLP 300
  301 PCKAFEVLVG FMEKDSNLQR VGYDAVLYCL SNNSMAKETG QFLRKIGERG YIPDSSTFNA 360
  361 AMSCLLKGHD LVETCRIFDG FVSRGVKPGF NGYLVLVQAL LNAQRFSEGD RYLKQMGVDG 420
  421 LLSSVYSYNA VIDCLCKARR IENAAMFLTE MQDRGISPNL VTFNTFLSGY SVRGDVKKVH 480
  481 GVLEKLLVHG FKPDVITFSL IINCLCRAKE IKDAFDCFKE MLEWGIEPNE ITYNILIRSC 540
  541 CSTGDTDRSV KLFAKMKENG LSPDLYAYNA TIQSFCKMRK VKKAEELLKT MLRIGLKPDN 600
  601 FTYSTLIKAL SESGRESEAR EMFSSIERHG CVPDSYTKRL VEELDLRKSG LSRETVSAS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle