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Protein Overview: SCC3_ARATH

General Information:
Name(s) found: SCC3_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|5123720|emb|CAB45374.1| stromalin protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20258987|gb|AAM14209.1| putative sister-chromatide cohesion protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20197564|gb|AAM15132.1| putative putative sister-chromatide cohesion protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20197313|gb|AAC63652.2| putative putative sister-chromatide cohesion protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18407498|ref|NP_566119.1| SCC3 (SISTER-CHROMATID COHESION PROTEIN 3); binding [Arabidopsis thaliana] [NCBI NR]
  • gi|17380918|gb|AAL36271.1| putative putative sister-chromatide cohesion protein [Arabidopsis thaliana] [NCBI NR]
  • Sister-chromatid cohesion protein 3 OS=Arabidopsis thaliana GN=SCC3 PE=1 SV=2 [Swiss-Prot]
  • (O82265) Putative sister-chromatide cohesion protein (Stromalin protein) [athaliana3702.FASTAC.txt]
  • putative sister-chromatide cohesion protein [Arabidopsis thaliana]gi|17380918|gb|AAL36271.1| putative putative sister-chromatide cohesion protein [Arabidopsis thaliana]gi|5123720|emb|CAB45374.1| stromalin protein [Arabidopsis thaliana]gi|20197564|gb|AA [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: SCC3 | SCC3 (sister-chromatide cohesion protein 3); binding | chr2:19638493-19643865 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative sister-chromatide cohesion protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative putative sister-chromatide cohesion protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • stromalin protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: SCC3, ATSCC3 | sister-chromatid cohesion protein 3 | chr2:19631423-19636795 FORWARD LENGTH=1098 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Cohesin complex subunit SA-1/2 OS=Arabidopsis thaliana GN=SA PE=2 SV=2 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 1098 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    chromosome [IDA]
    Biological Process: attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation [IMP]
    meiotic sister chromatid cohesion, centromeric [IMP]
    Molecular Function: binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDSPQGLKR SRDPDQDQDD DSGEAGKADG SGGENQERSS DQIELDDDDF QETRPKPKRS  60
   61 RTHPPQQNLI EVVKGNGDLI SKAVKIWVER YEDSPSLATT ELLSMLFQAC GAKYSIKDDL 120
  121 LDETDVDDVV VSLVNLARAG ELEDYQSSRK KELKNFKENL VSFWNNLIIE CQNGPLFDRV 180
  181 LFDKCMDYII ALSCTPPRVY RQTATLMGLQ LVTSFISVAN TLGSQRETTQ RQLNAESKKR 240
  241 ADGPRVDSLN KRLSVTHEQI TTLEDMMRKI FTGLFVHRYR DIDNDIRMSC IQSLGIWILS 300
  301 YPSLFLQDLY LKYLGWTLND KNAGVRKASL LALQKLYEMD ENVPTLGLFT QRFSNRMIEM 360
  361 ADDVDMSAAV CAIGLVKQLL RHQLIPDDDL GPLYDLLIDQ PQEIRRAIGE LVYDHLIAQK 420
  421 FNSSPSSLTG HDDSSSEIHI FRMLQILREF STDPILCVYV IDDVWEYMKA MKDWKCIISM 480
  481 LLDQNPRTGS TTDEDSTNLI RLLFVSIRKA VGEKIIPSTD NRKQYHSKAQ REIFENNRKD 540
  541 ITVAMMKNYP QLLRKFMADK AKVSSLVEII IFMKLELYSL KRQEQSFKAA VRLIKDAFFK 600
  601 HGEKEALRSC VKAITFCASE SKGELQDFSR GKLKDLEDEL LDKITSAIRE VKDGNDEYSL 660
  661 LVNLKRLYEL QLSKPVLVES MFDEIALTLH NFRNLDEEVI CFLLLNMHMY LAWYLHSIIN 720
  721 CEAISEASLS SLISKRDTLF EELSYFLNGI EESKKYGNQL SNRICAILAE TWCLFRKSNY 780
  781 DSGKLERLGY CPDSVFLEKF WKLCAEMFNT SDETDEEDEN KEYIEETNRD VSVIAACKLV 840
  841 ASDVVPKDYL GPEIISHLGM HGPGVTGIIK NLITFLRKKE DDISNIYLES LKRAYHRYSS 900
  901 ELSSGREESR VDKCLEEWRE LAGGLSGMYI GAARNKYRLE ILSVVKEGVE FAFRDAPKQL 960
  961 LFLEVAILPF ATRLSVSDII DIKKDVQGRI VHVNTDEDPS GWRPCFTFLE TLEEKCLKNE1020
 1021 DLQDDKEAAN VRRRGRPRKR PETERKRLFD EQSGSDEDES ISGGSDREDK LDEDAPLIET1080
 1081 IRSAARRKAL KGERSKGH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..121] MSA 5.108991 View MSA. No confident structure predictions are available.
    2 View Details [122..271] Pfam 63.958607 No description for PF08514.3 was found. No confident structure predictions are available.
    3 View Details [272..775] PSI-BLAST 35.522879 No description for 2vglB was found.
    4 View Details [776..902] deduced N/A No confident structure predictions are available.
    5 View Details [903..1098] MSA 2.083979 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

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    Created and Maintained by: Michael Riffle