| Protein: | SCC3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1098 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCC3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
1020.0 | [0..6] | [1095..362] |
|
|
999.0 | [0..1] | [1097..9] |
|
|
999.0 | [0..1] | [1097..9] |
|
|
998.0 | [0..1] | [1097..9] |
|
|
996.0 | [0..1] | [1097..9] |
|
|
996.0 | [0..1] | [1097..9] |
|
Region A: Residues: [1-121] |
1 11 21 31 41 51
| | | | | |
1 MEDSPQGLKR SRDPDQDQDD DSGEAGKADG SGGENQERSS DQIELDDDDF QETRPKPKRS 60
61 RTHPPQQNLI EVVKGNGDLI SKAVKIWVER YEDSPSLATT ELLSMLFQAC GAKYSIKDDL 120
121 L
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [122-271] |
1 11 21 31 41 51
| | | | | |
1 DETDVDDVVV SLVNLARAGE LEDYQSSRKK ELKNFKENLV SFWNNLIIEC QNGPLFDRVL 60
61 FDKCMDYIIA LSCTPPRVYR QTATLMGLQL VTSFISVANT LGSQRETTQR QLNAESKKRA 120
121 DGPRVDSLNK RLSVTHEQIT TLEDMMRKIF
|
| Detection Method: | |
| Confidence: | 63.958607 |
| Match: | PF08514.3 |
| Description: | No description for PF08514.3 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [272-775] |
1 11 21 31 41 51
| | | | | |
1 TGLFVHRYRD IDNDIRMSCI QSLGIWILSY PSLFLQDLYL KYLGWTLNDK NAGVRKASLL 60
61 ALQKLYEMDE NVPTLGLFTQ RFSNRMIEMA DDVDMSAAVC AIGLVKQLLR HQLIPDDDLG 120
121 PLYDLLIDQP QEIRRAIGEL VYDHLIAQKF NSSPSSLTGH DDSSSEIHIF RMLQILREFS 180
181 TDPILCVYVI DDVWEYMKAM KDWKCIISML LDQNPRTGST TDEDSTNLIR LLFVSIRKAV 240
241 GEKIIPSTDN RKQYHSKAQR EIFENNRKDI TVAMMKNYPQ LLRKFMADKA KVSSLVEIII 300
301 FMKLELYSLK RQEQSFKAAV RLIKDAFFKH GEKEALRSCV KAITFCASES KGELQDFSRG 360
361 KLKDLEDELL DKITSAIREV KDGNDEYSLL VNLKRLYELQ LSKPVLVESM FDEIALTLHN 420
421 FRNLDEEVIC FLLLNMHMYL AWYLHSIINC EAISEASLSS LISKRDTLFE ELSYFLNGIE 480
481 ESKKYGNQLS NRICAILAET WCLF
|
| Detection Method: | |
| Confidence: | 35.522879 |
| Match: | 2vglB |
| Description: | No description for 2vglB was found. |
|
Region A: Residues: [776-902] |
1 11 21 31 41 51
| | | | | |
1 RKSNYDSGKL ERLGYCPDSV FLEKFWKLCA EMFNTSDETD EEDENKEYIE ETNRDVSVIA 60
61 ACKLVASDVV PKDYLGPEII SHLGMHGPGV TGIIKNLITF LRKKEDDISN IYLESLKRAY 120
121 HRYSSEL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [903-1098] |
1 11 21 31 41 51
| | | | | |
1 SSGREESRVD KCLEEWRELA GGLSGMYIGA ARNKYRLEIL SVVKEGVEFA FRDAPKQLLF 60
61 LEVAILPFAT RLSVSDIIDI KKDVQGRIVH VNTDEDPSGW RPCFTFLETL EEKCLKNEDL 120
121 QDDKEAANVR RRGRPRKRPE TERKRLFDEQ SGSDEDESIS GGSDREDKLD EDAPLIETIR 180
181 SAARRKALKG ERSKGH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
