Protein: | SCC3_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 1098 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCC3_ARATH.
Description | E-value | Query Range |
Subject Range |
|
1020.0 | [0..6] | [1095..362] |
|
999.0 | [0..1] | [1097..9] |
|
999.0 | [0..1] | [1097..9] |
|
998.0 | [0..1] | [1097..9] |
|
996.0 | [0..1] | [1097..9] |
|
996.0 | [0..1] | [1097..9] |
Region A: Residues: [1-121] |
1 11 21 31 41 51 | | | | | | 1 MEDSPQGLKR SRDPDQDQDD DSGEAGKADG SGGENQERSS DQIELDDDDF QETRPKPKRS 60 61 RTHPPQQNLI EVVKGNGDLI SKAVKIWVER YEDSPSLATT ELLSMLFQAC GAKYSIKDDL 120 121 L |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [122-271] |
1 11 21 31 41 51 | | | | | | 1 DETDVDDVVV SLVNLARAGE LEDYQSSRKK ELKNFKENLV SFWNNLIIEC QNGPLFDRVL 60 61 FDKCMDYIIA LSCTPPRVYR QTATLMGLQL VTSFISVANT LGSQRETTQR QLNAESKKRA 120 121 DGPRVDSLNK RLSVTHEQIT TLEDMMRKIF |
Detection Method: | |
Confidence: | 63.958607 |
Match: | PF08514.3 |
Description: | No description for PF08514.3 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [272-775] |
1 11 21 31 41 51 | | | | | | 1 TGLFVHRYRD IDNDIRMSCI QSLGIWILSY PSLFLQDLYL KYLGWTLNDK NAGVRKASLL 60 61 ALQKLYEMDE NVPTLGLFTQ RFSNRMIEMA DDVDMSAAVC AIGLVKQLLR HQLIPDDDLG 120 121 PLYDLLIDQP QEIRRAIGEL VYDHLIAQKF NSSPSSLTGH DDSSSEIHIF RMLQILREFS 180 181 TDPILCVYVI DDVWEYMKAM KDWKCIISML LDQNPRTGST TDEDSTNLIR LLFVSIRKAV 240 241 GEKIIPSTDN RKQYHSKAQR EIFENNRKDI TVAMMKNYPQ LLRKFMADKA KVSSLVEIII 300 301 FMKLELYSLK RQEQSFKAAV RLIKDAFFKH GEKEALRSCV KAITFCASES KGELQDFSRG 360 361 KLKDLEDELL DKITSAIREV KDGNDEYSLL VNLKRLYELQ LSKPVLVESM FDEIALTLHN 420 421 FRNLDEEVIC FLLLNMHMYL AWYLHSIINC EAISEASLSS LISKRDTLFE ELSYFLNGIE 480 481 ESKKYGNQLS NRICAILAET WCLF |
Detection Method: | |
Confidence: | 35.522879 |
Match: | 2vglB |
Description: | No description for 2vglB was found. |
Region A: Residues: [776-902] |
1 11 21 31 41 51 | | | | | | 1 RKSNYDSGKL ERLGYCPDSV FLEKFWKLCA EMFNTSDETD EEDENKEYIE ETNRDVSVIA 60 61 ACKLVASDVV PKDYLGPEII SHLGMHGPGV TGIIKNLITF LRKKEDDISN IYLESLKRAY 120 121 HRYSSEL |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [903-1098] |
1 11 21 31 41 51 | | | | | | 1 SSGREESRVD KCLEEWRELA GGLSGMYIGA ARNKYRLEIL SVVKEGVEFA FRDAPKQLLF 60 61 LEVAILPFAT RLSVSDIIDI KKDVQGRIVH VNTDEDPSGW RPCFTFLETL EEKCLKNEDL 120 121 QDDKEAANVR RRGRPRKRPE TERKRLFDEQ SGSDEDESIS GGSDREDKLD EDAPLIETIR 180 181 SAARRKALKG ERSKGH |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.