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Protein Overview: gi|25315958, gi|...

General Information:
Name(s) found: gi|25315958 [NCBI NR]
gi|15223976 [NCBI NR]
gi|12323395 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • pir||F96804 hypothetical protein T5M16.11 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15223976|ref|NP_177876.1| O-methyltransferase family 2 protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12323395|gb|AAG51676.1|AC010704_20 putative caffeic acid 3-O-methyltransferase; 41078-42528 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 381 amino acids

    Gene Ontology:
    Cellular Component: cytosol [TAS]
    Biological Process: lignin biosynthetic process [ISS]
    Molecular Function: O-methyltransferase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNHLQDPLP TYPKPVLTKE EQEVDEKMVS LQAESIVNTV AFPMVLKAAF ELGVIDTIAA  60
   61 AGNDTWLSPC EIACSLPTKP TNPEAPVLLD RMLSLLVSHS ILKCRMIETG ENGRTGKIER 120
  121 VYAAEPVCKY FLRDSDGTGS LVPLFMLLHT QVFFKTWTNL KDVILEGRDA FNSAHGMKIF 180
  181 EYINSDQPFA ELFNRAMSEP STMIMKKVLD VYRGFEDVNT LVDVGGGNGT VLGLVTSKYP 240
  241 HIKGVNFDLA QVLTQAPFYP GVEHVSGDMF VEVPKGDAVF MKWILHDWGD EDCIKILKNC 300
  301 WKSLPEKGKI IIVEFVTPKE PKGGDLSSNT VFAMDLLMLT QCSGGKERSL SQFENLAFAS 360
  361 GFLRCEIICL AYSYSVIEFH K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..381] PSI-BLAST 80.39794 Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription factor activity
    		•  1.71787177946299 bayes_pls_golite062009
  • catalytic activity
    		•  1.62377578202456 bayes_pls_golite062009
  • transferase activity
    		•  1.27388514102581 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  1.19137807433068 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  1.14636302691827 bayes_pls_golite062009
  • methyltransferase activity
    		•  1.12602040164126 bayes_pls_golite062009
  • RNA methyltransferase activity
    		•  0.469605646812439 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle