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View Structure Prediction Details

Protein: gi|25315958, gi|...
Organism: Arabidopsis thaliana
Length: 381 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25315958, gi|....

Description E-value Query
Range
Subject
Range
gi|110736212, gi... - gi|27808586|gb|AAO24573.1| At1g77520 [Arabidopsis thaliana], gi|110736212|dbj|BAF00077.1| caffeic ac...
320.0 [0..1] [381..1]

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Predicted Domain #1
Region A:
Residues: [1-381]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNHLQDPLP TYPKPVLTKE EQEVDEKMVS LQAESIVNTV AFPMVLKAAF ELGVIDTIAA  60
   61 AGNDTWLSPC EIACSLPTKP TNPEAPVLLD RMLSLLVSHS ILKCRMIETG ENGRTGKIER 120
  121 VYAAEPVCKY FLRDSDGTGS LVPLFMLLHT QVFFKTWTNL KDVILEGRDA FNSAHGMKIF 180
  181 EYINSDQPFA ELFNRAMSEP STMIMKKVLD VYRGFEDVNT LVDVGGGNGT VLGLVTSKYP 240
  241 HIKGVNFDLA QVLTQAPFYP GVEHVSGDMF VEVPKGDAVF MKWILHDWGD EDCIKILKNC 300
  301 WKSLPEKGKI IIVEFVTPKE PKGGDLSSNT VFAMDLLMLT QCSGGKERSL SQFENLAFAS 360
  361 GFLRCEIICL AYSYSVIEFH K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 80.39794
Match: 1kywA
Description: Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transcription factor activity 1.71787177946299 bayes_pls_golite062009
catalytic activity 1.62377578202456 bayes_pls_golite062009
transferase activity 1.27388514102581 bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity 1.19137807433068 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 1.14636302691827 bayes_pls_golite062009
methyltransferase activity 1.12602040164126 bayes_pls_golite062009
RNA methyltransferase activity 0.469605646812439 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle