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Protein Overview: PUB44_ARATH

General Information:
Name(s) found: PUB44_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • U-box domain-containing protein 44 OS=Arabidopsis thaliana GN=PUB44 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 801 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: regulation of chlorophyll catabolic process [IMP]
    regulation of chlorophyll biosynthetic process [IMP]
    senescence [IMP]
    regulation of abscisic acid biosynthetic process [IMP]
    Molecular Function: ubiquitin-protein ligase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGSSDGDQS DDSSHFERGV DHIYEAFICP LTKEVMHDPV TLENGRTFER EAIEKWFKEC  60
   61 RDSGRPPSCP LTSQELTSTD VSASIALRNT IEEWRSRNDA AKLDIARQSL FLGNAETDIL 120
  121 QALMHVRQIC RTIRSNRHGV RNSQLIHMII DMLKSTSHRV RYKALQTLQV VVEGDDESKA 180
  181 IVAEGDTVRT LVKFLSHEPS KGREAAVSLL FELSKSEALC EKIGSIHGAL ILLVGLTSSN 240
  241 SENVSIVEKA DRTLENMERS EEIVRQMASY GRLQPLLGKL LEGSPETKLS MASFLGELPL 300
  301 NNDVKVLVAQ TVGSSLVDLM RSGDMPQREA ALKALNKISS FEGSAKVLIS KGILPPLIKD 360
  361 LFYVGPNNLP IRLKEVSATI LANIVNIGYD FDKATLVSEN RVENLLHLIS NTGPAIQCKL 420
  421 LEVLVGLTSC PKTVPKVVYA IKTSGAIISL VQFIEVREND DLRLASIKLL HNLSPFMSEE 480
  481 LAKALCGTAG QLGSLVAIIS EKTPITEEQA AAAGLLAELP DRDLGLTQEM LEVGAFEKII 540
  541 SKVFGIRQGD IKGMRFVNPF LEGLVRILAR ITFVFNKEAR AINFCREHDV ASLFLHLLQS 600
  601 NGQDNIQMVS AMALENLSLE SIKLTRMPDP PPVNYCGSIF SCVRKPHVVN GLCKIHQGIC 660
  661 SLRETFCLVE GGAVEKLVAL LDHENVKVVE AALAALSSLL EDGLDVEKGV KILDEADGIR 720
  721 HILNVLRENR TERLTRRAVW MVERILRIED IAREVAEEQS LSAALVDAFQ NADFRTRQIA 780
  781 ENALKHIDKI PNFSSIFPNI A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..131] PSI-BLAST 6.0 RAG1 DIMERIZATION DOMAIN
    2 View Details [132..242] deduced N/A No confident structure predictions are available.
    3 View Details [243..801] PSI-BLAST 48.522879 No description for 2z6gA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle