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Protein Overview: gi|9279617, gi|4...

General Information:
Name(s) found: gi|9279617 [NCBI NR]
gi|42572533 [NCBI NR]
gi|110740358 [NCBI NR]
Description(s) found:
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  • gi|9279617|dbj|BAB01075.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|42572533|ref|NP_974362.1| regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|110740358|dbj|BAF02074.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9LU80) Gb|AAF35409.1 [athaliana3702.FASTAC.txt]
  • unnamed protein product [Arabidopsis thaliana]gi|42572533|ref|NP_974362.1| regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Regulator of chromosome condensation (RCC1) family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | regulator of chromosome condensation (RCC1) family protein | chr3:9539300-9541386 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Ran GTPase binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Regulator of chromosome condensation (RCC1) family protein | chr3:9538063-9540149 FORWARD LENGTH=532 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Gb|AAF35409.1 OS=Arabidopsis thaliana GN=At3g26100 PE=2 SV=1 [ARATH-contam.fasta]
  • Putative uncharacterized protein At3g26100 OS=Arabidopsis thaliana GN=At3g26100 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 532 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: biological_process [ND]
    Molecular Function: Ran GTPase binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDATSGTPSL QYINLPEQSV STTSPPVSPF QRPKRHCFGD TTPGEFPLAA NPSIVLHVLT  60
   61 ECRLDPRDLA NLEATCSFFS QPANFAPDIN LSLSELAALD MCNKRVIFKP MNEEERQEMK 120
  121 RRCGGSWKLV LRFLLAGEAC CRREKSQAVA GPGHSVAVTS KGEVYTFGYN NSGQLGHGHT 180
  181 EDEARIQPVR SLQGVRIIQA AAGAARTMLI SDDGKVYACG KESFGEAEYG GQGTKPVTTP 240
  241 QLVTSLKNIF VVQAAIGNYF TAVLSREGKV YTFSWGNDGR LGHQTEAADV EPRPLLGPLE 300
  301 NVPVVQIAAG YCYLLALACQ PNGMSVYSVG CGLGGKLGHG SRTDEKYPRV IEQFQILNLQ 360
  361 PRVVAAGAWH AAVVGQDGRV CTWGWGRYGC LGHGNEECES VPKVVEGLSH VKAVHVATGD 420
  421 YTTFVVSDDG DVYSFGCGES ASLGHHPSFD EQGNRHANVL SPTVVTSLKQ VNERMVQISL 480
  481 TNSIYWNAHT FALTESGKLF AFGAGDQGQL GTELGKNQKE RCVPEKVDID LS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..113] deduced N/A No confident structure predictions are available.
    2 View Details [114..532] PSI-BLAST 72.154902 Regulator of chromosome condensation RCC1


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle