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Protein Overview: gi|15238897, gi|...

General Information:
Name(s) found: gi|15238897 [NCBI NR]
gi|10177762 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|15238897|ref|NP_199622.1| terpene synthase/cyclase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|10177762|dbj|BAB11075.1| terpene synthase [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 575 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: metabolic process [IEA]
    Molecular Function: magnesium ion binding [IEA]
    lyase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAITKNGSL SQTLVHCGPK SLSSFIPVRC LRFSKNPFPK KLVVTRARTS INSDHEAANR  60
   61 PLFQFPPSLL DDRFLSISAN QSEIDSLGRD IEALKAKVSE KLVCMDVKER IHLIHLLVSL 120
  121 GVAYHFEKQI EEFLKVDFEN VEDMNLGEED MYSISVIFRV FRLYRHKLSS DVFNRFKEEN 180
  181 GDFKKCLLDD KKSLTKQWAS RGNTWNYFVG GSNEEHLSGH IKNVLYLSQQ ENAEVVMSRE 240
  241 YIQFYEQETH HDETLLKFAK INFKFMQLHY VQELQTIVKW WKELDLESKI PNYYRVRAVE 300
  301 CLYWAMAVYM EPQYSVARII LSKSLVLWTI IDDLYDAYCT LPEAIAFTEN MERWETDAID 360
  361 MPDHMKVLLR SLIDLMEDFK GEVRSEGRLY SVEYGIDEWK RLFRADLTIS KWARTGYIPN 420
  421 YDEYMEVGIV TGGVDVTVAF AFIGMGEAGK EAFDWIRSRP KFIQTIDLKS RLRDDVATYK 480
  481 DEMARGEIAT GINCYMKQYK VTEEEAFLEF HRRIKHTSKL VNEEYFKTTV PLKLVRIAFN 540
  541 VGRVIDTNYK HGDGLTYTGI VGGQITSLFL DLITI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..575] PSI-BLAST 178.0 5-EPI-ARISTOLOCHENE SYNTHASE FROM NICOTIANA TABACUM

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.87397377711135 bayes_pls_golite062009
  • transferase activity
    		•  1.34929557841705 bayes_pls_golite062009
  • transferase activity, transferring alkyl or aryl (other than methyl) groups
    		•  1.22586398285056 bayes_pls_golite062009
  • prenyltransferase activity
    		•  0.302854173865421 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle