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Protein Overview: NUD25_ARATH

General Information:
Name(s) found: NUD25_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Nudix hydrolase 25 OS=Arabidopsis thaliana GN=NUDT25 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 175 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: diadenosine tetraphosphate catabolic process [IDA]
    Molecular Function: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENLPPGYRP NVGVCLINSD NLVFVASRLN VPGAWQMPQG GIEDGEDPKS AAMRELQEET  60
   61 GVVSAEIVSE VPNWLTYDFP PAVKAKVNRL WGGEWHGQAQ KWYLVRLRND EDEKEINLAN 120
  121 NEADSEFAEW KWAKPEEVVE QAVDYKRPTY EEVIKTFGSF LNDTGRAAKC KSAKW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..175] PSI-BLAST 31.0 Diadenosine tetraphosphate hydrolase (Ap4A hydrolase)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  1.86826130963189 bayes_pls_golite062009
  • catalytic activity
    		•  1.86119802438676 bayes_pls_golite062009
  • RNA pyrophosphohydrolase activity
    		•  0.681788425915311 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.544115189438 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.54377405132398 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.468153646537656 bayes_pls_golite062009
  • binding
    		•  0.0581982566440131 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle