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Protein Overview: EF109_ARATH

General Information:
Name(s) found: EF109_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75266731|sp|Q9SZ06.1|EF109_ARATH RecName: Full=Ethylene-responsive transcription factor ERF109 [NCBI NR]
  • pir||T04787 hypothetical protein F10M10.180 - Arabidopsis thaliana [NCBI NR]
  • gi|7270391|emb|CAB80158.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|4455186|emb|CAB36718.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|21464577|gb|AAM52243.1| AT4g34410/F10M10_180 [Arabidopsis thaliana] [NCBI NR]
  • gi|17381278|gb|AAL36057.1| AT4g34410/F10M10_180 [Arabidopsis thaliana] [NCBI NR]
  • gi|15235365|ref|NP_195167.1| RRTF1 ({REDOX RESPONSIVE TRANSCRIPTION FACTOR 1); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|13272441|gb|AAK17159.1|AF325091_1 putative protein [Arabidopsis thaliana] [NCBI NR]
  • Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=1 SV=1 [Swiss-Prot]
  • (Q9SZ06) Hypothetical protein (AT4g34410/F10M10_180) [athaliana3702.FASTAC.txt]
  • AT4g34410/F10M10_180 [Arabidopsis thaliana]gi|7270391|emb|CAB80158.1| putative protein [Arabidopsis thaliana]gi|4455186|emb|CAB36718.1| putative protein [Arabidopsis thaliana]gi|17381278|gb|AAL36057.1| AT4g34410/F10M10_180 [Arabidopsis thaliana]gi|132 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | AP2 domain-containing transcription factor, putative | chr4:16451996-16452802 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • AT4g34410/F10M10_180 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: RRTF1 | redox responsive transcription factor 1 | chr4:16451992-16452798 FORWARD LENGTH=268 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 268 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    Biological Process: regulation of transcription, DNA-dependent [ISS]
    response to chitin [IEP]
    defense response to fungus [IEP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHYPNNRTEF VGAPAPTRYQ KEQLSPEQEL SVIVSALQHV ISGENETAPC QGFSSDSTVI  60
   61 SAGMPRLDSD TCQVCRIEGC LGCNYFFAPN QRIEKNHQQE EEITSSSNRR RESSPVAKKA 120
  121 EGGGKIRKRK NKKNGYRGVR QRPWGKFAAE IRDPKRATRV WLGTFETAED AARAYDRAAI 180
  181 GFRGPRAKLN FPFVDYTSSV SSPVAADDIG AKASASASVS ATDSVEAEQW NGGGGDCNME 240
  241 EWMNMMMMMD FGNGDSSDSG NTIADMFQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..129] MSA 1.130995 View MSA. No confident structure predictions are available.
    2 View Details [130..268] PSI-BLAST 22.0 SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.339357445627225 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle