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Protein Overview: gi|15231514, gi|...

General Information:
Name(s) found: gi|15231514 [NCBI NR]
gi|11994432 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|15231514|ref|NP_189245.1| glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|11994432|dbj|BAB02434.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 508 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: carbohydrate metabolic process [IEA]
    Molecular Function: catalytic activity [IEA]
    cation binding [IEA]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYPLSTNSR WIIDEKGQRV KLACVNWPSH LQPVVAEGLS KQSVDDLAKK IMAMGFNCVR  60
   61 FTWPLDLATN ETLANNVTVR QSFQSLGLND DISGFETKNP SMIDLPLIEA YKKVVAKLGN 120
  121 NNVMVILDNH VTKPGWCCGY NDGNGFFGDT FFDPTTWIAG LTKIAMTFKG ATNVVGMSLR 180
  181 NELRGPKQNV DDWFKYMQQG AEAVHEANPN VLVILSGLSY DTDLSFVRSR HVNLTFTRKL 240
  241 VFELHRYSFT NTNTWSSKNP NEACGEILKS IENGGGFNLR DFPVFLSEFG IDLRGKNVND 300
  301 NRYIGCILGW AAENDVDWSI WTLQGSYYLR EGVVGMSEFY GILDSDWVRV RSQSFLQRLS 360
  361 LILSPLQGPG SQSKVYNLVF HPLTGLCMLQ SILDPTKVTL GLCNESQPWS YTPQNTLTLK 420
  421 DKSLCLESTG PNAPVKLSET SCSSPNLSEW ETISASNMLL AAKSTNNSLC LDVDETNNLM 480
  481 ASNCKCVKGE DSSCDPISQW FKIVKVSK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..73] PSI-BLAST 31.0 Endocellulase E1
    2 View Details [74..508] PSI-BLAST 43.522879 Xylan binding domain, CBM13 (Endo-1,4-beta-xylanase C-terminal domain); Xylanase A, catalytic core


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle