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Protein Overview: gi|4585924, gi|1...

General Information:
Name(s) found: gi|4585924 [NCBI NR]
gi|25369338 [NCBI NR]
gi|15224433 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|4585924|gb|AAD25584.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • pir||C84463 hypothetical protein At2g04930 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15224433|ref|NP_178570.1| NLI interacting factor (NIF) family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 277 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: biological_process [ND]
    Molecular Function: phosphoprotein phosphatase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVTTSSSCC GHWYVFQGIC IGCKSKVHKS QFRKFDYIFK GLQLSNEAVA LTKSLTTKHS  60
   61 CLNEKKLHLV LDLDHTLLHS KLVSNLSQAE RYLIQEASSR TREDLWKFRP IGHPIDRLIK 120
  121 LRPFVRDFLK EANEMFTMFV YTMGSRIYAK AILEMIDPKK LYFGNRVITK DESPRMKTLN 180
  181 LVLAEERGVV IVDDTRDIWP HHKNNLIQIR KYKYFRRSGL DSNSYSEKKT DEGENDGGLA 240
  241 NVLKLLREVH RRFFIVEVEE VLESMDVRSL LKEGYRL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..277] PSI-BLAST 49.69897 Three-dimensional structure of a RNA-polymerase II binding protein with associated ligand.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.02290994020378 bayes_pls_golite062009
  • hydrolase activity
    		•  0.71914501009647 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle