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View Structure Prediction Details

Protein: gi|4585924, gi|1...
Organism: Arabidopsis thaliana
Length: 277 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|4585924, gi|1....

Description E-value Query
Range
Subject
Range
gi|15230893, gi|... - gi|225194907|gb|ACN81954.1| C-terminal domain phosphatase-like 5 [Arabidopsis thaliana], gi|15230893...
283.0 [0..10] [273..329]

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Predicted Domain #1
Region A:
Residues: [1-277]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVTTSSSCC GHWYVFQGIC IGCKSKVHKS QFRKFDYIFK GLQLSNEAVA LTKSLTTKHS  60
   61 CLNEKKLHLV LDLDHTLLHS KLVSNLSQAE RYLIQEASSR TREDLWKFRP IGHPIDRLIK 120
  121 LRPFVRDFLK EANEMFTMFV YTMGSRIYAK AILEMIDPKK LYFGNRVITK DESPRMKTLN 180
  181 LVLAEERGVV IVDDTRDIWP HHKNNLIQIR KYKYFRRSGL DSNSYSEKKT DEGENDGGLA 240
  241 NVLKLLREVH RRFFIVEVEE VLESMDVRSL LKEGYRL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.69897
Match: 1ta0A
Description: Three-dimensional structure of a RNA-polymerase II binding protein with associated ligand.
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.02290994020378 bayes_pls_golite062009
hydrolase activity 0.71914501009647 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle