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Protein Overview: GLK2_ARATH

General Information:
Name(s) found: GLK2_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
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  • Transcription activator GLK2 OS=Arabidopsis thaliana GN=GLK2 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 386 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    Biological Process: positive regulation of gene-specific transcription [IDA][IMP]
    regulation of chlorophyll biosynthetic process [IGI]
    chloroplast organization [IMP]
    negative regulation of flower development [IGI]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]
    transcription regulator activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTVSPAPVL IGNNSKDTYM AADFADFTTE DLPDFTTVGD FSDDLLDGID YYDDLFIGFD  60
   61 GDDVLPDLEI DSEILGEYSG SGRDEEQEME GNTSTASETS ERDVGVCKQE GGGGGDGGFR 120
  121 DKTVRRGKRK GKKSKDCLSD ENDIKKKPKV DWTPELHRKF VQAVEQLGVD KAVPSRILEI 180
  181 MNVKSLTRHN VASHLQKYRS HRKHLLAREA EAASWNLRRH ATVAVPGVGG GGKKPWTAPA 240
  241 LGYPPHVAPM HHGHFRPLHV WGHPTWPKHK PNTPASAHRT YPMPAIAAAP ASWPGHPPYW 300
  301 HQQPLYPQGY GMASSNHSSI GVPTRQLGPT NPPIDIHPSN ESIDAAIGDV ISKPWLPLPL 360
  361 GLKPPSVDGV MTELQRQGVS NVPPLP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..143] PSI-BLAST 7.221849 Crystal structure of the response regulatory protein PrrA from Mycobacterium Tuberculosis
    2 View Details [144..206] PSI-BLAST 18.39794 Arr10-B
    3 View Details [207..386] MSA 13.151996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • signal transducer activity
    		•  2.07885074402355 bayes_pls_golite062009
  • molecular transducer activity
    		•  2.07885074402355 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.72455852503325 bayes_pls_golite062009
  • two-component response regulator activity
    		•  1.53373140048441 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle