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Protein Overview: gi|15227541, gi|...

General Information:
Name(s) found: gi|7487147 [NCBI NR]
gi|3548816 [NCBI NR]
gi|15227541 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • pir||T02712 similar to late embryogenesis abundant proteins [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|3548816|gb|AAC34488.1| similar to late embryogenesis abundant proteins [Arabidopsis thaliana] [NCBI NR]
  • gi|15227541|ref|NP_178413.1| CAAX amino terminal protease family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1805 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: proteolysis [ISS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSSSSSSSI FLQFPPARIT TASPFILRRS RKRGARFKRQ SRNLVLVNSS IFPPPFDGSV  60
   61 PLDSSLAPSL AGIASGLAVY LSSRFFGKSL EKISDKIVDD VVVGEWILFT TPTPFNRFVL 120
  121 LRCSLLSFDD DSEKSLSDRL VTEERHFVTL DSGKIVRDGA VTDEKTPLEY QRVCITMEDG 180
  181 GVVSLDWPAN LDIREERGLD TTVVFIPGTP EGSMEEGVRS FVCEALRRGV FPVVMNPRGC 240
  241 AGSPLTTPRL FTAGDSDDIS TALRFLSKTR PWTTLTAVGR GYGANMLTKY LAEAGERTPL 300
  301 TAAVCIDNPF DLEEITRTSP YSTSLDQQLT RGLVEILLAN KELFQGRAKA FDVGKALCSK 360
  361 SVREFDKALS MVTYGCESIE DFYSSCATRE VIGEVKVPLL FIQNDDVVPP YTIPRSSIAE 420
  421 NPFTSLLLCS SSPNLIDGRT VAVSWCQDLA KIDFPMLAMQ WLTAVELGLL KGRHPLLEDV 480
  481 DVTVNPSKGL VFSEARAPEK SIGAKKLVQA AHEKTVNGYH LDPFRETLED SDMTPNSNLS 540
  541 PETDLEKNVK IDYGSDETEN NIVSTRVESI EDNESNVEES DRGQVLQTAE VVVSMLDVTM 600
  601 PGTLKAEEKK KVMDAVGRGE TVLTALQDAV PEDVREKLTT AVTGILQSGG TKLNLENLKL 660
  661 PSIAPGLKKA EEEKKETSSA IGQSDSYSPD PKDKSDGLVS GSDETISGSD NSPGGVELEH 720
  721 SPSKVSQRNS DSGKSQPVDN DQDDSPGNHE SHTNEKTSAA DDSEMASEAK SDSANQGPIG 780
  781 AEAVTNNDDK VEQGSGVATH QGQVETSKND EKGAPIANEK SSVADGFEKA SDAKNDSTNP 840
  841 QPVGADDITS DGDKVDQGVV LAQQQRKDET SKSDENAKQS ATDQNKVTST DNEGDAGKSS 900
  901 ASQPVEKDES NDQSKETKVM QPVSDQTKPA IQEPNQPNFN VSQAFEALTG MDDSTQVAVN 960
  961 SVFGVLENMI SQLDEEKKEG NEVSDEKNLK DEKNLKDAKN VTNEVVSPSE EEIPYKRETK1020
 1021 SLMPSAKSRD PACSVSETEK CSDNDKVTGV VIEKQLGRDE FVIGKHSPKI LPERKTDSIE1080
 1081 NSSHDGYLGE ELSKEKIAKQ LDLDTTTALM LDYYPEEGKW KLLDQQPKRL DDDYYPEEGK1140
 1141 WKLLDQQPEY LGNVADNAAA SRNTHDNVQV HSLSVDNEET IEPSYVIVDH EQELELSGMH1200
 1201 DAADNQNDGP HKLDEGCEEL EHLINVIVSD SLNVEIQRRM GSAGMRQIES QLSRDIKKVA1260
 1261 KTFSYAVVYS EPTWTFKRNS KTSNVPAGKV GKLRGDAIIR AIASAVQEAH FLRQVLPIGV1320
 1321 VVGSVLAALR KYFDVSTTTN NAKRDVVPGR RQKYENNGAM ASVLPDKVSK ETKQNNSSIG1380
 1381 EMVESGLQSI NNKSAMVGAV TAALGASAML VQHEDPQRGG IMSKSSDKDS QQKESGQLDQ1440
 1441 SSMVGSFAEK AMSIAGPAVP TKETGEVDQD RIVAMLADLG QRGGILSLVG KLALLWGGLR1500
 1501 GAMSLTDRLI QFLHMDEWPL LKRAVGFIGM VLVLWSPVVI PLLPTLLQNW STSNPSRVAE1560
 1561 LASVVGLYVA VFILVMLWGK RVRKYENPFK QYGLDLKASN KEKIQEFLKA FAGGITVVLL1620
 1621 IQFINAISGA AFLSRPPYFP HSFDAMKWLK GCGQFLLLII RGFTAATFVV LVEELLFRSW1680
 1681 MPAEIAIDLG YHQSIIITGL IFALFQRSLR SIPGFWLLSL ALTWARERSQ GNLIVPIGLR1740
 1741 AGIIASSFIL QSGGFLTYNP SSPVWIAGSR PSQPFSGVVG LMVSLALALI LYPKRSPETK1800
 1801 MQKYN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..138] deduced N/A No confident structure predictions are available.
    2 View Details [139..444] PSI-BLAST 33.69897 No description for 1zoiA was found.
    3 View Details [445..567] deduced N/A No confident structure predictions are available.
    4 View Details [568..784] deduced N/A No confident structure predictions are available.
    5 View Details [785..861] deduced N/A No confident structure predictions are available.
    6 View Details [862..930] deduced N/A No confident structure predictions are available.
    7 View Details [931..1305] PSI-BLAST 16.0 Heavy meromyosin subfragment
    8 View Details [1306..1438] PSI-BLAST 3.522879 No description for 2dfsA was found.
    9 View Details [1439..1516] deduced N/A No confident structure predictions are available.
    10 View Details [1517..1696] MSA 1.086995 View MSA. No confident structure predictions are available.
    11 View Details [1697..1805] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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