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Protein Overview: gi|15237259, gi|...

General Information:
Name(s) found: gi|15237259 [NCBI NR]
gi|134031908 [NCBI NR]
gi|10177813 [NCBI NR]
Description(s) found:
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  • gi|15237259|ref|NP_197715.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|134031908|gb|ABO45691.1| At5g23240 [Arabidopsis thaliana] [NCBI NR]
  • gi|10177813|dbj|BAB11179.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • (Q9FMX6) Gb|AAD21732.1 [athaliana3702.FASTAC.txt]
  • unnamed protein product [Arabidopsis thaliana]gi|15237259|ref|NP_197715.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 DNAJ heat shock N-terminal domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr5:7826860-7828537 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • heat shock protein binding / unfolded protein binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr5:7826857-7828534 REVERSE LENGTH=465 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At5g23240 OS=Arabidopsis thaliana GN=At5g23240 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 465 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: protein folding [IEA][ISS]
    Molecular Function: heat shock protein binding [IEA]
    unfolded protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPAIFSPTT LPPSTATWPC STSQKLITVR SPLKFKCRAT SSSSSITDFD LYDLLGIDRS  60
   61 SDKSQIKSAY RALQKRCHPD IAGDPGHDMA IILNEAYQLL SDPISRQAYD KEQAKLEELR 120
  121 GYTGKPIYSV WCGPETEQRA AFVDEVKCVG CLKCALCAEK TFAIETAYGR ARVVAQWADP 180
  181 ESKIKEAIEA CPVDCISMVE RSDLAPLEFL MSKQPRGNVR IGVGNTVGER VSNVFVDVKK 240
  241 FQERYAKAMS RTTKETSQRE VQISAVEAIR SISNWLYWRS SPYTKPLSPE SNMSLTFTKR 300
  301 KKAVDPDIRK LQDVVAAMKQ ADQSGRTKEK GSAYLLGEDY WSPSNAALPS SGNNNGSKAS 360
  361 SNPQVTRKTF PSEEKPTSRR ENRRQFRIKK FPIGTAIVAV FLVQYQASYR AASELNDHIG 420
  421 GSLALSIVNS PWQQILLAGV TWYFIGAMLL QLVEAVQHKL EDKET

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..135] PSI-BLAST 21.522879 Solution structure of J-domain from mouse DnaJ subfamily C menber 5
    2 View Details [136..304] PSI-BLAST 28.69897 The crystal structure of Hsp40 Ydj1
    3 View Details [305..465] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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