YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: XPF_ARATH

General Information:
Name(s) found: XPF_ARATH [Swiss-Prot]
Description(s) found:
Found 20 descriptions.
SHOW ALL
  • DNA repair endonuclease UVH1 OS=Arabidopsis thaliana GN=UVH1 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 956 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to oxidative stress [IMP]
    DNA repair [IEP]
    double-strand break repair via homologous recombination [IMP]
    response to radiation [IEP]
    nucleotide-excision repair [IMP]
    Molecular Function: single-stranded DNA specific endodeoxyribonuclease activity [IMP]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALKYHQQII SDLLEDSNGG LLILSSGLSL AKLIASLLIL HSPSQGTLLL LLSPAAQSLK  60
   61 SRIIHYISSL DSPTPTEITA DLPANQRYSL YTSGSPFFIT PRILIVDLLT QRIPVSSLAG 120
  121 IFILNAHSIS ETSTEAFIIR IVKSLNSSAY IRAFSDRPQA MVSGFAKTER TMRALFLRKI 180
  181 HLWPRFQLDV SQELEREPPE VVDIRVSMSN YMVGIQKAII EVMDACLKEM KKTNKVDVDD 240
  241 LTVESGLFKS FDEIVRRQLD PIWHTLGKRT KQLVSDLKTL RKLLDYLVRY DAVSFLKFLD 300
  301 TLRVSESYRS VWLFAESSYK IFDFAKKRVY RLVKASDVKS KEHVKNKSGK KRNSKGETDS 360
  361 VEAVGGETAT NVATGVVVEE VLEEAPKWKV LREILEETQE ERLKQAFSEE DNSDNNGIVL 420
  421 VACKDERSCM QLEDCITNNP QKVMREEWEM YLLSKIELRS MQTPQKKKQK TPKGFGILDG 480
  481 VVPVTTIQNS EGSSVGRQEH EALMAAASSI RKLGKTTDMA SGNNNPEPHV DKASCTKGKA 540
  541 KKDPTSLRRS LRSCNKKTTN SKPEILPGPE NEEKANEAST SAPQEANAVR PSGAKKLPPV 600
  601 HFYALESDQP ILDILKPSVI IVYHPDMGFV RELEVYKAEN PLRKLKVYFI FYDESTEVQK 660
  661 FEASIRRENE AFESLIRQKS SMIIPVDQDG LCMGSNSSTE FPASSTQNSL TRKAGGRKEL 720
  721 EKETQVIVDM REFMSSLPNV LHQKGMKIIP VTLEVGDYIL SPSICVERKS IQDLFQSFTS 780
  781 GRLFHQVEMM SRYYRIPVLL IEFSQDKSFS FQSSSDISDD VTPYNIISKL SLLVLHFPRL 840
  841 RLLWSRSLHA TAEIFTTLKS NQDEPDETRA IRVGVPSEEG IIENDIRAEN YNTSAVEFLR 900
  901 RLPGVSDANY RSIMEKCKSL AELASLPVET LAELMGGHKV AKSLREFLDA KYPTLL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..344] PSI-BLAST 60.045757 No description for 2i4iA was found.
    2 View Details [345..561] deduced N/A No confident structure predictions are available.
    3 View Details [562..706] deduced N/A No confident structure predictions are available.
    4 View Details [707..956] PSI-BLAST 32.30103 No description for 3c65A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle