Protein Overview: gi|88900314, gi|...

General Information:
Name(s) found:	gi\|88900314 [NCBI NR] gi\|7442213 [NCBI NR] gi\|7268083 [NCBI NR] gi\|4455308 [NCBI NR] gi\|21617927 [NCBI NR] gi\|15236351 [NCBI NR]
Description(s) found: SHOW ONLY BEST	gi\|88900314\|gb\|ABD57469.1\| At4g13790 [Arabidopsis thaliana] [NCBI NR] pir\|\|T05248 probable auxin-induced protein F18A5.180 - Arabidopsis thaliana [NCBI NR] gi\|7268083\|emb\|CAB78421.1\| SAUR-AC-like protein (small auxin up RNA) [Arabidopsis thaliana] [NCBI NR] gi\|4455308\|emb\|CAB36843.1\| SAUR-AC-like protein (small auxin up RNA) [Arabidopsis thaliana] [NCBI NR] gi\|21617927\|gb\|AAM66977.1\| SAUR-AC-like protein (small auxin up RNA) [Arabidopsis thaliana] [NCBI NR] gi\|15236351\|ref\|NP_193115.1\| auxin-responsive protein, putative [Arabidopsis thaliana] [NCBI NR] (Q9SVN4) SAUR-AC-like protein (Small auxin UP RNA) [athaliana3702.FASTAC.txt] SAUR-AC-like protein (small auxin up RNA) [Arabidopsis thaliana]gi\|7268083\|emb\|CAB78421.1\| SAUR-AC-like protein (small auxin up RNA) [Arabidopsis thaliana]gi\|4455308\|emb\|CAB36843.1\| SAUR-AC-like protein (small auxin up RNA) [Arabidopsis thaliana]gi\|152 [nrdb_11152004_Chlamydomonas] Tax_Id=3702 Auxin-responsive protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta] \| Symbols: \| auxin-responsive protein, putative \| chr4:7999842-8000120 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta] At4g13790 [Arabidopsis thaliana] [nr-271106-contam.fasta] SAUR-AC-like protein (small auxin up RNA) [Arabidopsis thaliana] [nr-271106-contam.fasta] unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta] \| Symbols: \| SAUR-like auxin-responsive protein family \| chr4:7999846-8000124 REVERSE LENGTH=92 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta] At4g13790 OS=Arabidopsis thaliana GN=F18A5.180 PE=4 SV=1 [ARATH-contam.fasta] At4g13790 OS=Arabidopsis thaliana GN=F18A5.180 PE=2 SV=1 [ARATH.fasta.20160308]
Organism:	Arabidopsis thaliana
Length:	92 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	response to far red light [IEP] response to red light [IEP] response to auxin stimulus [ISS]
Molecular Function:	molecular_function [ND]

Sequence:
Sequence: [PDR BLAST] [ProtParam]	1 11 21 31 41 51 \| \| \| \| \| \| 1 MAFLRSFFAT KHIIRRSFTT ESLSTPKGFF AVYVGENLKK KRYLVPVCYL NKPSFQALLR 60 61 KAEEEFGFNH PTGGLSLPCD EAFFFTVTSQ IR

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..92]	Pfam	35.657577	No description for PF02519.5 was found. No confident structure predictions are available.

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.97

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle