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Protein Overview: gi|25412329, gi|...

General Information:
Name(s) found: gi|4432864 [NCBI NR]
gi|25412329 [NCBI NR]
gi|15224744 [NCBI NR]
Description(s) found:
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  • gi|4432864|gb|AAD20712.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • pir||E84649 hypothetical protein At2g25530 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15224744|ref|NP_180123.1| AFG1-like ATPase family protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9SKJ6) At2g25530 protein [athaliana3702.FASTAC.txt]
  • hypothetical protein [Arabidopsis thaliana]gi|25412329|pir||E84649 hypothetical protein At2g25530 [imported] - Arabidopsis thalianagi|15224744|ref|NP_180123.1| AFG1-like ATPase family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 AFG1-like ATPase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | AFG1-like ATPase family protein | chr2:10870137-10873675 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ATPase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | AFG1-like ATPase family protein | chr2:10863059-10866597 FORWARD LENGTH=655 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • AFG1-like protein OS=Arabidopsis thaliana GN=At2g25530 PE=4 SV=1 [ARATH-contam.fasta]
  • AFG1-like ATPase family protein OS=Arabidopsis thaliana GN=At2g25530 PE=4 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 655 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: ATPase activity [ISS]
    ATP binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRTGPHRVW QIWHPSFDIS TKPTKEIYTD TNKPNQQYDK RSIFHHLNRD RKASLQRRNH  60
   61 NRSLKQQIMP NVSQISTVLR LAFSCKRRLS NGLHFVARSY STSDPPKQPS GPLTNYSKLV 120
  121 EQGRLQHDPY QEKVVSAFEN LFGRLEHFEK QMEDYHVRLA EWEKKREEER RKLMVEEAEK 180
  181 KEDDGMWASV NKQGQKLLGR WVLGRRQMNV EPGVGKWVSY LNRERKLDSI VGSRPAVPPA 240
  241 PKGLYIYGNV GCGKTMLMDM FYGATDGIIR HRQRFHFHEA MLKINEQMHK YWKENGAEKP 300
  301 MQYSISSWIM NLPVDEKVKE WLAGEEFYKQ QLQMKHILPA VADKFLVDQQ SSKKGASILC 360
  361 FDEIQTVDVF AIVALSGIMS RLLTTGTVLV ATSNRAPREL NQDGMQKEIF DKFISKLEKH 420
  421 CEIISIGSEV DYRRVAAKNS AENVHYLWPL NDAVLEEFEK MWRQVTDQYG GEITSATLPV 480
  481 MFGRTVEVPE SCSGVARFTF EYLCGRPVGA ADYIAVAKNY HTIFISDIPA MSMEIRDKAR 540
  541 RFITLVDELY NHHCCLVSSA ETAIDELFQG TAEGTLFDLE SFQFETETED SRLRRDVLAE 600
  601 GSISAAGSPS SIVSMLSGEE EMFAFARAAS RLIEMQTPLY LEGVRFLHPY FHQQK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..99] deduced N/A No confident structure predictions are available.
    2 View Details [100..315] PSI-BLAST 22.0 No description for 2qgzA was found.
    3 View Details [316..449] FFAS03 1.06 No description for 2qgzA was found.
    4 View Details [450..655] MSA 4.159986 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle