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Protein Overview: CRF1_ARATH

General Information:
Name(s) found: CRF1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|92856649|gb|ABE77414.1| At4g11140 [Arabidopsis thaliana] [NCBI NR]
  • gi|75220260|sp|O82503.1|CRF1_ARATH RecName: Full=Ethylene-responsive transcription factor CRF1; AltName: Full=Protein CYTOKININ RESPONSE FACTOR 1 [NCBI NR]
  • pir||T01919 probable Ap2 domain protein - Arabidopsis thaliana [NCBI NR]
  • gi|7267813|emb|CAB81215.1| putative Ap2 domain protein [Arabidopsis thaliana] [NCBI NR]
  • gi|4850293|emb|CAB43049.1| putative Ap2 domain protein [Arabidopsis thaliana] [NCBI NR]
  • gi|48479290|gb|AAT44916.1| putative AP2/EREBP transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|3600050|gb|AAC35537.1| contains similarity to AP2 domain containing proteins [Arabidopsis thaliana] [NCBI NR]
  • gi|15237053|ref|NP_192852.1| CRF1 (CYTOKININ RESPONSE FACTOR 1); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=1 SV=1 [Swiss-Prot]
  • (O82503) F2P3.5 protein (Putative AP2 domain protein) [athaliana3702.FASTAC.txt]
  • putative Ap2 domain protein [Arabidopsis thaliana]gi|7267813|emb|CAB81215.1| putative Ap2 domain protein [Arabidopsis thaliana]gi|48479290|gb|AAT44916.1| putative AP2/EREBP transcription factor [Arabidopsis thaliana]gi|3600050|gb|AAC35537.1| contains s [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: CRF1 | CRF1 (CYTOKININ RESPONSE FACTOR 1); DNA binding / transcription factor | chr4:6794926-6795789 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative Ap2 domain protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At4g11140 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative AP2/EREBP transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • contains similarity to AP2 domain containing proteins [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: CRF1 | cytokinin response factor 1 | chr4:6794930-6795793 REVERSE LENGTH=287 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 287 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    Biological Process: leaf development [IMP]
    regulation of transcription, DNA-dependent [ISS]
    transcription factor import into nucleus [IDA]
    cotyledon development [IMP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METEKKVSLP RILRISVTDP YATDSSSDEE EEVDFDALST KRRRVKKYVK EVVLDSVVSD  60
   61 KEKPMKKKRK KRVVTVPVVV TTATRKFRGV RQRPWGKWAA EIRDPSRRVR VWLGTFDTAE 120
  121 EAAIVYDNAA IQLRGPNAEL NFPPPPVTEN VEEASTEVKG VSDFIIGGGE CLRSPVSVLE 180
  181 SPFSGESTAV KEEFVGVSTA EIVVKKEPSF NGSDFSAPLF SDDDVFGFST SMSESFGGDL 240
  241 FGDNLFADMS FGSGFGFGSG SGFSSWHVED HFQDIGDLFG SDPVLTV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..80] deduced N/A No confident structure predictions are available.
    2 View Details [81..154] PSI-BLAST 25.39794 SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE
    3 View Details [155..287] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.339357445627225 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle