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Protein Overview: gi|15237690, gi|...

General Information:
Name(s) found: gi|15237690 [NCBI NR]
gi|10178223 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|15237690|ref|NP_201247.1| DNA polymerase V family [Arabidopsis thaliana] [NCBI NR]
  • gi|10178223|dbj|BAB11603.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1306 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: transcription [IEA]
    DNA replication [ISS]
    Molecular Function: DNA binding [IEA]
    DNA-directed DNA polymerase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSKKRSNDD STELVENDNL PDSSIVKKKK SKTEKMNTVA NYDSDTAAAA AEVPGVASSG  60
   61 KDMEKKKMRK ASDKQRRLEA ALKKNNGVGA SRPKPIPVAV NSNSDEADDE SLPSAAASSS 120
  121 SLPLNYFTDL ASSDASVREA AAESLVLRLQ EIQKQYEMLP DKESVDGGLM LEAEKNDGLD 180
  181 NCAPHLRYAL RRLIRGVSSS RECARQGFAL GLTLPVSVIS SINVESLLNL IADSLSVSSS 240
  241 MTGQDIKECL LGRLFAYGAL ARSGRLIEDW QSDKDSPIIK EFTNALIGLA AKKRYLQEPA 300
  301 VHILLDFVDK LPTEPVVTHV MEAPELYKWF EQATEVGNPD ALLLALKLHE KVSVDHPIFS 360
  361 KLLPVPFSSG KFFSADHLTA IGNCLKESTF CQPRVHSLWP VIVDMLLPEA VVQSEDVVSV 420
  421 SSSSKKQKRN RKSNPVEEEA TNNIRNFCEV FMEGDLLSST HVRKHLAFDI LLLLLPKLPA 480
  481 SFIQHVLSLK FVQCLMDILS TKDSWLHKVA THFLVELMDW VKDDDTKRVA VTMALQKHSE 540
  541 GKFDNITRTK TVKVLAAELE TEDGCTLYLQ NLMNLFVDEQ HVPEESSNMK WSLEPCSLNS 600
  601 DQSQTTDDNS DNGSNEEKDS VGTTGNSDVL KSWVIESLPG ILKHAKLSPE AKLRLQKQIL 660
  661 KFLAVQGLFL ASLGTEVTSF ELQEKFKWPK TATPAALCQM CIEQLQLLLS NSQKIEKPLS 720
  721 KGNALEQPDD PVSYFMKFLS TLQNIPSVSL FRSLNEADEK AFKELQETES KLLKEERNCG 780
  781 LSTDPNKFHA LRHLVVQLLL QILLHPGEFS EAATELSVCC DKAFSSLDLL KSDGQGEADD 840
  841 EEEPAVMDVL VDTLLSLLPH SSAPMRSSIE QVFKYFCQDV TNDGLLRMLR VIKKDLKPSR 900
  901 HQEDQDSDDL DDDEEDCLAI EDAEEENEEM GETGESDEQT DDSEAVTGVV PMAVDREVPE 960
  961 NSDDSDDDDG MDDDAMFRMD TYLAQIFKEK RNQAGGETAQ SQLVLFKLRV LSLLEIYLHE1020
 1021 NSDKPQVMTV YLNLVQAMLN PSTAESSLPL LQRIWGIIQK KIFKAKEFPK DESMEFSALA1080
 1081 SLLEKNLKLA AKPFKSKKSG VDPSKKKQSA AWNRYKMITH LGQNSTYWVM KIIDSRKFSE1140
 1141 TELEKILDVF RSAVTGYFDS RKSQLKIDFL EEVFRRRPWI GHQLFGFLLE ASVNANVEFR1200
 1201 RLEALDLITE TLRSLIPINE NTQADSRKTM TTHLKELILL IKELVGNMPE AKVRRAQVRK1260
 1261 FCGRIFQMVS SLKLTKSFLK GLGQDGRTAC EDAFGDLFLN LKNTEH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..122] MSA 4.012996 View MSA. No confident structure predictions are available.
    2 View Details [123..356] deduced N/A No confident structure predictions are available.
    3 View Details [357..430] deduced N/A No confident structure predictions are available.
    4 View Details [431..609] deduced N/A No confident structure predictions are available.
    5 View Details [610..833] deduced N/A No confident structure predictions are available.
    6 View Details [834..1065] MSA 2.021996 View MSA. No confident structure predictions are available.
    7 View Details [1066..1161] deduced N/A No confident structure predictions are available.
    8 View Details [1162..1306] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle