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Protein Overview: COB22_ARATH

General Information:
Name(s) found: COB22_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Coatomer subunit beta'-2 OS=Arabidopsis thaliana GN=At1g52360 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 926 amino acids

    Gene Ontology:
    Cellular Component: membrane coat [IEA]
    COPI vesicle coat [ISS]
    Biological Process: vesicle-mediated transport [IEA]
    intracellular protein transport [IEA]
    Molecular Function: protein binding [IEA]
    structural molecule activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLRLEIKRK LAQRSERVKS VDLHPTEPWI LASLYSGTLC IWNYQTQVMA KSFEVTELPV  60
   61 RSAKFVARKQ WVVAGADDMY IRVYNYNTMD KVKVFEAHSD YIRCVAVHPT LPYVLSSSDD 120
  121 MLIKLWDWEK GWACTQIFEG HSHYVMQVTF NPKDTNTFAS ASLDRTIKIW NLGSPDPNFT 180
  181 LDAHQKGVNC VDYFTGGDKP YLITGSDDHT AKVWDYQTKS CVQTLEGHTH NVSAVCFHPE 240
  241 LPIIITGSED GTVRIWHATT YRLENTLNYG LERVWAIGYI KSSRRVVIGY DEGTIMVKLG 300
  301 REIPVASMDN TGKIIWAKHN EIQTANIKSI GADYEVTDGE RLPLSVKELG TCDLYPQSLK 360
  361 HNPNGRFVVV CGDGEYIIYT ALAWRNRSFG SGLEFVWSSE GECAVRESSS KIKIFSKNFQ 420
  421 EKRSIRPTFS AEKIFGGTLL AMCSSDFICF YDWAECRLIQ RIDVTVKNLY WADSGDLVAI 480
  481 ASDTSFYILK FNRDLVTSHF DSGRPTEEEG VEDAFEVLHE NDERVRTGIW VGDCFIYNNS 540
  541 SWKLNYCVGG EVTTMYHLDR PMYLLGYLAS QSRVFLVDKE FNVIGYTLLL SLIEYKTLVM 600
  601 RGDLDKASEI LPTIPKDQHN SVAHFLESRG MIEDALEIAT DPDYRFELAI QLGRLEIAQE 660
  661 IAVEVQSESK WKQLGELAMS SGKLQMAEEC MKYAMDLSGL LLLYSSLGDA EGVTKLATLA 720
  721 KEQGKNNVAF LCLFMLGKLE DCLQLLVESN RIPEAALMAR SYLPSKVSEI VALWRKDLSK 780
  781 VNSKAAESLA DPEEYSNLFE DWQVALSVEA KAVETRGVYT GAKDYPSHAD KSSMTLVEAF 840
  841 RNLQVEEEES LENGDMDHEE VVAEENGNEQ RNEDDVAEHV EEHHEEKEAE EEEGIVDGDS 900
  901 TDGAVLVNGS EADEEWGTNN EGNPSA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..96] PSI-BLAST 86.69897 PAF-AH Holoenzyme: Lis1/Alfa2
    2 View Details [97..435] PSI-BLAST 7.0 No description for 3bwsA was found.
    3 View Details [436..737] PSI-BLAST 4.045757 No description for 2ojhA was found.
    4 View Details [738..926] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

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