YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|12322993, gi|...

General Information:
Name(s) found: gi|25285710 [NCBI NR]
gi|15217812 [NCBI NR]
gi|12322993 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • pir||H86405 probable oxidoreductase [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15217812|ref|NP_174124.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12322993|gb|AAG51483.1|AC069471_14 oxidoreductase, putative [Arabidopsis thaliana] [NCBI NR]
  • (Q9C7F0) Oxidoreductase, putative [athaliana3702.FASTAC.txt]
  • oxidoreductase, putative [Arabidopsis thaliana]gi|15217812|ref|NP_174124.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana]gi|25285710|pir||H86405 probable oxidoreductase [imported] - Arabidopsis thaliana [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Oxidoreductase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | oxidoreductase, 2OG-Fe(II) oxygenase family protein | chr1:9771780-9773332 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • oxidoreductase, putative [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:9771793-9773345 FORWARD LENGTH=322 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein OS=Arabidopsis thaliana GN=F13K9.13 PE=3 SV=1 [ARATH-contam.fasta]
  • 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein OS=Arabidopsis thaliana GN=F13K9.13 PE=3 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 322 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: 2-oxoglutarate-dependent dioxygenase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAISSESQVP LSLPIIDFSN PDLKPETPEW DLVRSQVRKA LEEYGCFEAL FDGASMELRK  60
   61 ALFESSKEVF DLPLETKLST KTDVHYEGYL TIPRVPIQEG MGFYGIDNPN VVNDLTHKLW 120
  121 PQGNIFVGKN VQSFAEKLIE LNLTVRTMTL ESFGLEKYME EHLNAANKHF QLLKYKGISD 180
  181 DNTENKIGFY PHIDRHFLTI LCQNDAVDGL EIKTKDGEEW IKVKPSQASS FIVMAGASLH 240
  241 VLLNGGVFPP LHRVVITGKK DRYVAALFTI PKEGVIINAP EEMVDDEHPR LYKPFDFWGF 300
  301 LKFSNLPNAR KDISDLTDYC AL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..322] PSI-BLAST 88.154902 The structure of ACC oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.29176034651701 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.188497825387454 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.75

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle