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View Structure Prediction Details

Protein: gi|12322993, gi|...
Organism: Arabidopsis thaliana
Length: 322 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12322993, gi|....

Description E-value Query
Range
Subject
Range
gi|73761685 - gi|73761685|gb|AAZ83342.1| ACC oxidase 1 [Gossypium hirsutum]
335.0 [0..9] [322..1]

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Predicted Domain #1
Region A:
Residues: [1-322]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAISSESQVP LSLPIIDFSN PDLKPETPEW DLVRSQVRKA LEEYGCFEAL FDGASMELRK  60
   61 ALFESSKEVF DLPLETKLST KTDVHYEGYL TIPRVPIQEG MGFYGIDNPN VVNDLTHKLW 120
  121 PQGNIFVGKN VQSFAEKLIE LNLTVRTMTL ESFGLEKYME EHLNAANKHF QLLKYKGISD 180
  181 DNTENKIGFY PHIDRHFLTI LCQNDAVDGL EIKTKDGEEW IKVKPSQASS FIVMAGASLH 240
  241 VLLNGGVFPP LHRVVITGKK DRYVAALFTI PKEGVIINAP EEMVDDEHPR LYKPFDFWGF 300
  301 LKFSNLPNAR KDISDLTDYC AL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 88.154902
Match: 1w9yA
Description: The structure of ACC oxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.29176034651701 bayes_pls_golite062009
oxidoreductase activity 0.188497825387454 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle