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Protein Overview: gi|12322993, gi|...

General Information:
Name(s) found: gi|25285710 [NCBI NR]
gi|15217812 [NCBI NR]
gi|12322993 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • pir||H86405 probable oxidoreductase [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15217812|ref|NP_174124.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12322993|gb|AAG51483.1|AC069471_14 oxidoreductase, putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 322 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: 2-oxoglutarate-dependent dioxygenase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAISSESQVP LSLPIIDFSN PDLKPETPEW DLVRSQVRKA LEEYGCFEAL FDGASMELRK  60
   61 ALFESSKEVF DLPLETKLST KTDVHYEGYL TIPRVPIQEG MGFYGIDNPN VVNDLTHKLW 120
  121 PQGNIFVGKN VQSFAEKLIE LNLTVRTMTL ESFGLEKYME EHLNAANKHF QLLKYKGISD 180
  181 DNTENKIGFY PHIDRHFLTI LCQNDAVDGL EIKTKDGEEW IKVKPSQASS FIVMAGASLH 240
  241 VLLNGGVFPP LHRVVITGKK DRYVAALFTI PKEGVIINAP EEMVDDEHPR LYKPFDFWGF 300
  301 LKFSNLPNAR KDISDLTDYC AL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..322] PSI-BLAST 88.154902 The structure of ACC oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.29176034651701 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.188497825387454 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.75

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle