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Protein Overview: gi|3402675, gi|7...

General Information:
Name(s) found: gi|7487062 [NCBI NR]
gi|3402675 [NCBI NR]
gi|15225073 [NCBI NR]
Description(s) found:
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  • pir||T02570 hypothetical protein At2g39320 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|3402675|gb|AAC28978.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15225073|ref|NP_181464.1| OTU-like cysteine protease family protein [Arabidopsis thaliana] [NCBI NR]
  • (O80949) At2g39320 protein [athaliana3702.FASTAC.txt]
  • hypothetical protein [Arabidopsis thaliana]gi|7487062|pir||T02570 hypothetical protein At2g39320 [imported] - Arabidopsis thalianagi|15225073|ref|NP_181464.1| OTU-like cysteine protease family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 OTU-like cysteine protease family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | OTU-like cysteine protease family protein | chr2:16424670-16425595 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • cysteine-type peptidase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Cysteine proteinases superfamily protein | chr2:16417592-16418517 REVERSE LENGTH=189 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Cysteine proteinase-like protein OS=Arabidopsis thaliana GN=At2g39320 PE=4 SV=1 [ARATH-contam.fasta]
  • Cysteine proteinases superfamily protein OS=Arabidopsis thaliana GN=At2g39320 PE=4 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 189 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: cysteine-type peptidase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKSDGNCQF RALADQLYQN SDCHELVRQE IVKQNMSLST NSQWGDEVTL RVAADVYQVK  60
   61 IILITSIKLI PFMEFLPKSQ KEPDKVIHMS YLAGIHFNSI YKKNKEKGSR SSSSSSSAVW 120
  121 MKLQRKKENE AKKKEEEEKE RKDMEKEEKK KDKEDKKKDK EDKKKAKVQK EKKEKKEKKN 180
  181 RNHHFHYSE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..103] FFAS03 3.16 Structure of Otubain-2
    2 View Details [104..189] MSA 2.080992 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.465394995609075 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle