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Protein Overview: PP407_ARATH

General Information:
Name(s) found: PP407_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 747 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic development ending in seed dormancy [NAS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLTKTLIRR SLSTFASSPS DSLLADKALT FLKRHPYQLH HLSANFTPEA ASNLLLKSQN  60
   61 DQALILKFLN WANPHQFFTL RCKCITLHIL TKFKLYKTAQ ILAEDVAAKT LDDEYASLVF 120
  121 KSLQETYDLC YSTSSVFDLV VKSYSRLSLI DKALSIVHLA QAHGFMPGVL SYNAVLDATI 180
  181 RSKRNISFAE NVFKEMLESQ VSPNVFTYNI LIRGFCFAGN IDVALTLFDK METKGCLPNV 240
  241 VTYNTLIDGY CKLRKIDDGF KLLRSMALKG LEPNLISYNV VINGLCREGR MKEVSFVLTE 300
  301 MNRRGYSLDE VTYNTLIKGY CKEGNFHQAL VMHAEMLRHG LTPSVITYTS LIHSMCKAGN 360
  361 MNRAMEFLDQ MRVRGLCPNE RTYTTLVDGF SQKGYMNEAY RVLREMNDNG FSPSVVTYNA 420
  421 LINGHCVTGK MEDAIAVLED MKEKGLSPDV VSYSTVLSGF CRSYDVDEAL RVKREMVEKG 480
  481 IKPDTITYSS LIQGFCEQRR TKEACDLYEE MLRVGLPPDE FTYTALINAY CMEGDLEKAL 540
  541 QLHNEMVEKG VLPDVVTYSV LINGLNKQSR TREAKRLLLK LFYEESVPSD VTYHTLIENC 600
  601 SNIEFKSVVS LIKGFCMKGM MTEADQVFES MLGKNHKPDG TAYNIMIHGH CRAGDIRKAY 660
  661 TLYKEMVKSG FLLHTVTVIA LVKALHKEGK VNELNSVIVH VLRSCELSEA EQAKVLVEIN 720
  721 HREGNMDVVL DVLAEMAKDG FLPNGIS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..747] PSI-BLAST 8.69897 Clathrin D6 Coat


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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