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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PP407_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLTKTLIRR SLSTFASSPS DSLLADKALT FLKRHPYQLH HLSANFTPEA ASNLLLKSQN  60
   61 DQALILKFLN WANPHQFFTL RCKCITLHIL TKFKLYKTAQ ILAEDVAAKT LDDEYASLVF 120
  121 KSLQETYDLC YSTSSVFDLV VKSYSRLSLI DKALSIVHLA QAHGFMPGVL SYNAVLDATI 180
  181 RSKRNISFAE NVFKEMLESQ VSPNVFTYNI LIRGFCFAGN IDVALTLFDK METKGCLPNV 240
  241 VTYNTLIDGY CKLRKIDDGF KLLRSMALKG LEPNLISYNV VINGLCREGR MKEVSFVLTE 300
  301 MNRRGYSLDE VTYNTLIKGY CKEGNFHQAL VMHAEMLRHG LTPSVITYTS LIHSMCKAGN 360
  361 MNRAMEFLDQ MRVRGLCPNE RTYTTLVDGF SQKGYMNEAY RVLREMNDNG FSPSVVTYNA 420
  421 LINGHCVTGK MEDAIAVLED MKEKGLSPDV VSYSTVLSGF CRSYDVDEAL RVKREMVEKG 480
  481 IKPDTITYSS LIQGFCEQRR TKEACDLYEE MLRVGLPPDE FTYTALINAY CMEGDLEKAL 540
  541 QLHNEMVEKG VLPDVVTYSV LINGLNKQSR TREAKRLLLK LFYEESVPSD VTYHTLIENC 600
  601 SNIEFKSVVS LIKGFCMKGM MTEADQVFES MLGKNHKPDG TAYNIMIHGH CRAGDIRKAY 660
  661 TLYKEMVKSG FLLHTVTVIA LVKALHKEGK VNELNSVIVH VLRSCELSEA EQAKVLVEIN 720
  721 HREGNMDVVL DVLAEMAKDG FLPNGIS

YRC Informatics Platform - Version 3.0
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