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Protein Overview: gi|15242552, gi|...

General Information:
Name(s) found: gi|38603816 [NCBI NR]
gi|15242552 [NCBI NR]
gi|110736116 [NCBI NR]
gi|10176994 [NCBI NR]
Description(s) found:
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  • gi|38603816|gb|AAR24653.1| At5g40020 [Arabidopsis thaliana] [NCBI NR]
  • gi|15242552|ref|NP_198818.1| pathogenesis-related thaumatin family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|110736116|dbj|BAF00030.1| thaumatin-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|10176994|dbj|BAB10226.1| thaumatin-like protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9FLD4) Thaumatin-like protein [athaliana3702.FASTAC.txt]
  • At5g40020 [Arabidopsis thaliana]gi|10176994|dbj|BAB10226.1| thaumatin-like protein [Arabidopsis thaliana]gi|15242552|ref|NP_198818.1| pathogenesis-related thaumatin family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Pathogenesis-related thaumatin family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | pathogenesis-related thaumatin family protein | chr5:16040124-16041522 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • thaumatin-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At5g40020 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Pathogenesis-related thaumatin superfamily protein | chr5:16022896-16024294 REVERSE LENGTH=256 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At5g40020 OS=Arabidopsis thaliana GN=At5g40020 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 256 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: response to other organism [ISS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFQSTSLLQ LFIISSCIVY GKVTSHEVTF YVQNKCSFPI WPAVAPNSGH PVLASGGFYL  60
   61 PCGGIKRIDA PLGWSGRIWA RTGCDFTSNS KQACETGDCD GHLECNGLIG KPPATLIQIA 120
  121 VQADKSKPNF YDVSLVDGYN LPVVVNSKPV SSKCTILGCH KDLKTTCPEE LQVLNEEGRV 180
  181 VACKSACLAF DNDRFCCRNA YGTPEKCKRN TYSMLFKEAC PNYYSYAYET PPPLVTCSAK 240
  241 EYLITFCPSN WGHSST

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..256] PSI-BLAST 76.0 No description for 2ahnA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle