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Protein Overview: SCRK4_ARATH

General Information:
Name(s) found: SCRK4_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75311776|sp|Q9M1B9.1|SCRK4_ARATH RecName: Full=Probable fructokinase-4 [NCBI NR]
  • gi|6996284|emb|CAB75445.1| fructokinase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15231692|ref|NP_191507.1| pfkB-type carbohydrate kinase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|114050651|gb|ABI49475.1| At3g59480 [Arabidopsis thaliana] [NCBI NR]
  • pir||T49289 fructokinase-like protein - Arabidopsis thaliana [NCBI NR]
  • Probable fructokinase-4 OS=Arabidopsis thaliana GN=At3g59480 PE=2 SV=1 [Swiss-Prot]
  • (Q9M1B9) Fructokinase-like protein [athaliana3702.FASTAC.txt]
  • fructokinase-like protein [Arabidopsis thaliana]gi|15231692|ref|NP_191507.1| pfkB-type carbohydrate kinase family protein [Arabidopsis thaliana]gi|11259268|pir||T49289 fructokinase-like protein - Arabidopsis thaliana [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 PfkB-type carbohydrate kinase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | pfkB-type carbohydrate kinase family protein | chr3:21994080-21995417 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • kinase/ ribokinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Probable fructokinase-4 [nr-271106-contam.fasta]
  • fructokinase-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At3g59480 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | pfkB-like carbohydrate kinase family protein | chr3:21983103-21984440 FORWARD LENGTH=326 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 326 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: D-ribose metabolic process [IEA]
    Molecular Function: ribokinase activity [IEA]
    kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASNGEKSL IVSFGEMLID FVPTVSGVSL ADAPGFIKAP GGAPANVAIA ISRLGGRAAF  60
   61 VGKLGDDEFG HMLAGILKQN GVSAEGINFD TGARTALAFV TLRSDGEREF MFYRNPSADM 120
  121 LLRPDELNLD VIRSAKVFHY GSISLIVEPC RSAHLKAMEV AKEAGALLSY DPNLRLPLWP 180
  181 SKEEAQKQIL SIWDKAEVIK VSDEELMFLT GSDKVDDETA LSLWHSNLKL LLVTLGEKGC 240
  241 RYYTKSFRGS VDPFHVDAVD TTGAGDSFVG ALLCKIVDDR AVLEDEARLR EVLRLANACG 300
  301 AITTTKKGAI PALPTESEVQ SLLKGN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..326] PSI-BLAST 59.69897 Crystal structure of aminoimidazole riboside kinase from Salmonella enterica

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ribokinase activity
    		•  4.13972810632318 bayes_pls_golite062009
  • carbohydrate kinase activity
    		•  2.49008585493084 bayes_pls_golite062009
  • 2-dehydro-3-deoxygluconokinase activity
    		•  2.46896350528821 bayes_pls_golite062009
  • kinase activity
    		•  1.97263499488006 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.9404172142043 bayes_pls_golite062009
  • catalytic activity
    		•  1.74474587246986 bayes_pls_golite062009
  • transferase activity
    		•  1.45532444493305 bayes_pls_golite062009
  • phosphofructokinase activity
    		•  1.00534507358024 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.562479151224388 bayes_pls_golite062009
  • binding
    		•  0.110689912513147 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle