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Protein Overview: PANB2_ARATH

General Information:
Name(s) found: PANB2_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • 3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial OS=Arabidopsis thaliana GN=KPHMT2 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 354 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDA]
    Biological Process: pantothenate biosynthetic process [IGI][ISS]
    Molecular Function: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [IGI][ISS]
    zinc ion binding [IDA]
    cobalt ion binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASLVRSCC SRASRAITTV RFMSNVPEDT VYGGPKPQNS NQRVTLTQLR QKHRKGEPIT  60
   61 MVTAYDYPSA VHIDTAGIDV CLVGDSAAMV VHGYDTTLPI SLEEMLVHCR AVARGAKRPL 120
  121 LVGDLPFGTY ESSTNQAVDT AVRVLKEGGM DAIKLEGGSP SRITAAKSIV EAGIAVMGHV 180
  181 GLTPQAISVL GGFRPQGKNI ASAVKVVETA MALQEAGCFS VVLECVPPPV AAAATSALNI 240
  241 PTIGIGAGPF CSGQVLVYHD LLGMMQHPHH AKVTPKFCKQ YAQVGEVINK ALLEYKEEVS 300
  301 KHLFPGPSHS PYKISSSDLD GFLSELQKLG LDKAASDAAA SAEKMDHSDS PSSQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..354] PSI-BLAST 82.69897 Ketopantoate hydroxymethyltransferase PanB

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
    		•  4.08693637310631 bayes_pls_golite062009
  • catalytic activity
    		•  2.59838799615646 bayes_pls_golite062009
  • hydroxymethyl-, formyl- and related transferase activity
    		•  2.05689968523792 bayes_pls_golite062009
  • transferase activity
    		•  1.07154136609184 bayes_pls_golite062009
  • glycine hydroxymethyltransferase activity
    		•  0.646649320021871 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.366715189574293 bayes_pls_golite062009
  • oxo-acid-lyase activity
    		•  0.0960362356555544 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  0.0846611486307003 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.75

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle