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Protein Overview: DSK2A_ARATH

General Information:
Name(s) found: DSK2A_ARATH [Swiss-Prot]
Description(s) found:
Found 18 descriptions.
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  • Ubiquitin domain-containing protein DSK2a OS=Arabidopsis thaliana GN=DSK2A PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 538 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: protein modification process [IEA]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGEADSRQP LTAEGVAVAV NVRCSNGTKF SVTTSLDSTV ESFKELIAQN SDVPANQQRL  60
   61 IYKGRILKDD QTLLSYGLQA DHTVHMVRGF VPSSPSAPAA NAGNQTTAPQ AVGSNDSSNL 120
  121 GGGESLFPGL GFNPLGGGNA MAGLFGSGLP DLEQAQQQLA QNPNMIREMM NTPAIQNLMN 180
  181 NPEFMRSMIM NNPQMRELVD RNPELGHVLN DPSILRQTLE AARNPELMRE MMRNTDRAMS 240
  241 NIESMPEGFN MLRRMYENVQ EPLMNATTMS ENAGNNTSSN PFAALLGNQG VTTQGSDTSN 300
  301 NISAPNAETG TPNANPLPNP WGATAGQTTA PGRTNAGLGG LGGLGGLGGL GMLGADSPLG 360
  361 ATPDASQLSQ ILQNPAMSQM MQSVLSNPQY MNQLMSLNPQ LRSMLDMNPQ LREMMQNPDF 420
  421 LRQFSSPEMM QQMMSLQQSL FSQNRNTAGQ DPTQTGAATG TANNGGLDLL MNMFGSLGAG 480
  481 GLSGTNQPNV PPEERFATQL QQLQEMGFYD RAENIRALLA TNGNVNAAVE RLLGSIGQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..95] PSI-BLAST 22.30103 Solution Structure of S5a UIM-1/Ubiquitin Complex
    2 View Details [96..282] FFAS03 1.05 Structure of the DNA repair protein hHR23a
    3 View Details [283..467] PSI-BLAST 6.09691 Sec24
    4 View Details [468..538] PSI-BLAST 9.0 Solution Structure of RSGI RUH-016, a UBA Domain from mouse cDNA

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.793170221927894 bayes_pls_golite062009
  • protein binding
    		•  0.756373756021813 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  0.432660225684123 bayes_pls_golite062009
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  0.410473383777825 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle