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Protein Overview: RH5_ARATH

General Information:
Name(s) found: RH5_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75333350|sp|Q9C551.1|RH5_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 5 [NCBI NR]
  • pir||A86444 probable RNA helicase [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|21436171|gb|AAM51373.1| putative p68 RNA helicase [Arabidopsis thaliana] [NCBI NR]
  • gi|19347812|gb|AAL86356.1| putative p68 RNA helicase [Arabidopsis thaliana] [NCBI NR]
  • gi|15222526|ref|NP_174479.1| STRS1 (STRESS RESPONSE SUPPRESSOR 1); ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding [Arabidopsis thaliana] [NCBI NR]
  • gi|12321459|gb|AAG50784.1|AC074309_1 RNA helicase, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|12321302|gb|AAG50723.1|AC079041_16 p68 RNA helicase, putative [Arabidopsis thaliana] [NCBI NR]
  • DEAD-box ATP-dependent RNA helicase 5 OS=Arabidopsis thaliana GN=RH5 PE=1 SV=1 [Swiss-Prot]
  • (Q9C551) RNA helicase, putative (P68 RNA helicase, putative) (Putative p68 RNA helicase) [athaliana3702.FASTAC.txt]
  • putative p68 RNA helicase [Arabidopsis thaliana]gi|19347812|gb|AAL86356.1| putative p68 RNA helicase [Arabidopsis thaliana]gi|12321459|gb|AAG50784.1| RNA helicase, putative [Arabidopsis thaliana]gi|12321302|gb|AAG50723.1| p68 RNA helicase, putative [Ar [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 DEAD/DEAH box helicase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: STRS1 | STRS1 (STRESS RESPONSE SUPPRESSOR 1); ATP-dependent helicase | chr1:11479901-11482687 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative p68 RNA helicase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • p68 RNA helicase, putative [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DEAD-box ATP-dependent RNA helicase 5 [nr-271106-contam.fasta]
  • ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • RNA helicase, putative [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: STRS1 | DEA(D/H)-box RNA helicase family protein | chr1:11479921-11482707 FORWARD LENGTH=537 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 537 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: nucleic acid binding [IEA]
    ATP binding [IEA]
    ATP-dependent helicase activity [IEA][ISS]
    helicase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGQKQELPV SGEPLAVESP MTNKKKKKSK KNKHTEENHE VEEVPQEVTN GVEEELSNKE  60
   61 KKKKRKREEK ESEKNKKKDV PEKKLEAEDL GEGESEQQKV VVTGKGVEEA KYAALKTFAE 120
  121 SNLPENVLDC CKTFEKPSPI QSHTWPFLLD GRDLIGIAKT GSGKTLAFGI PAIMHVLKKN 180
  181 KKIGGGSKKV NPTCLVLSPT RELAVQISDV LREAGEPCGL KSICVYGGSS KGPQISAIRS 240
  241 GVDIVIGTPG RLRDLIESNV LRLSDVSFVV LDEADRMLDM GFEEPVRFIL SNTNKVRQMV 300
  301 MFSATWPLDV HKLAQEFMDP NPIKVIIGSV DLAANHDVMQ IIEVLDERAR DQRLIALLEK 360
  361 YHKSQKNRVL VFALYKVEAE RLERFLQQRG WKAVSIHGNK AQSERTRSLS LFKEGSCPLL 420
  421 VATDVAARGL DIPDVEVVIN YTFPLTTEDY VHRIGRTGRA GKKGVAHTFF TPLNKGLAGE 480
  481 LVNVLREAGQ VVPADLLKFG THVKKKESKL YGAHFKEIAA DAPKATKITF DNSDDED

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..537] PSI-BLAST 86.0 No description for 2db3A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle