YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: LECT6_ARATH

General Information:
Name(s) found: LECT6_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
SHOW ALL
  • Lectin-like protein OS=Arabidopsis thaliana GN=LLP PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 274 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    cell wall [IDA]
    apoplast [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: sugar binding [IEA]
    carbohydrate binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIHKLCFLA LLLAHTTSAV NLNLNLKTSE LVFLGDAELG PASDGVSRSG ALSMTRDENP  60
   61 FSHGQSLWST PVPFKPSSNS SSPYPFETSF TFSISTRIKP APGHGLAFVV VPSIESDGPG 120
  121 PAGYLGIFNK TNNGNPKNHI FAVEFDVFQD KGFGDINDNH VGININSVTS VVAEKAGYWV 180
  181 QTGIGKMKHW SFKEFKLSNG ERYKAWIEYR NSKVTVTLAP ETVKKPKKPL IVAHLDLSKV 240
  241 FLQNMYPGFS GAMGRGVERH DIWSWTFQNS AKRI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..274] PSI-BLAST 62.522879 Legume lectin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.49960529341364 bayes_pls_golite062009
  • sugar binding
    		•  1.2933880998245 bayes_pls_golite062009
  • monosaccharide binding
    		•  0.641323484799369 bayes_pls_golite062009
  • protein binding
    		•  0.501917973797597 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle