Protein Overview: S40A1_ARATH

General Information:
Name(s) found:	S40A1_ARATH [Swiss-Prot]
Description(s) found: Found 11 descriptions. SHOW ALL	Solute carrier family 40 member 1 OS=Arabidopsis thaliana GN=IREG1 PE=3 SV=1 [Swiss-Prot]
Organism:	Arabidopsis thaliana
Length:	524 amino acids
Gene Ontology:
Cellular Component:	plasma membrane [IDA]
Biological Process:	cobalt ion transport [IMP]
Molecular Function:	transporter activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENETELRVV HQEEQQREEG EDESQPQNPP PALRRRFVIY LYVGYFLARW SARTWEFSVA  60
   61 LYMIHLWPNS LLLAAIYGAI ESGSTAIFGP IVGQWVEGMD YVKVLRLWLL FQNLSYTIAG 120
  121 GAVIKLLLVS DLKSRNLPVF AILIVLTNLA GAIGVLSTLA GTILIERDWA VVMSEGHPPA 180
  181 VLTKMNSVIR GIDLSSKLLS PVITGLIISF VSLKASAITF AAWATITAWV EYWLFISVYS 240
  241 GVPAITRSNE RRILRSRTKQ VEGRDAPVSV SIVPGTEEGY TGNPPSRTGI LVILDRMSKS 300
  301 SFVGAWRIYF NQEVVLPGVS LALLFFTVLS FGTLMTATLQ WEGIPTYIIG IGRGISATVG 360
  361 LAATLVYPLM QSRLSTLRTG LWSFWSQWSC LLVCVGSIWV KKDKIASYML MAGVAASRLG 420
  421 LWMFDLAVIQ QMQDLVSESD RCVVGGVQNS LQSALDLMAY LLGIIVSNPK DFWILTLISF 480
  481 STVSLAGMLY TIHLYRIRNH IFHLEKIPLL NKCIFKLLPS RGNV

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..524]	PSI-BLAST	22.0	Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
substrate-specific transmembrane transporter activity	5.46247398538901	bayes_pls_golite062009
ion transmembrane transporter activity	4.58978526526921	bayes_pls_golite062009
cation transmembrane transporter activity	4.31967711223954	bayes_pls_golite062009
transporter activity	4.09176719149278	bayes_pls_golite062009
substrate-specific transporter activity	3.59744164024479	bayes_pls_golite062009
transmembrane transporter activity	3.5865018981083	bayes_pls_golite062009
active transmembrane transporter activity	1.59419818573076	bayes_pls_golite062009
anion transmembrane transporter activity	1.24023641504332	bayes_pls_golite062009
secondary active transmembrane transporter activity	1.22264637452409	bayes_pls_golite062009
binding	1.05701989682533	bayes_pls_golite062009
polyol transmembrane transporter activity	0.924836669821548	bayes_pls_golite062009
alcohol transmembrane transporter activity	0.924836669821548	bayes_pls_golite062009
glycerol transmembrane transporter activity	0.812001619402678	bayes_pls_golite062009
solute:cation symporter activity	0.74591237387473	bayes_pls_golite062009
symporter activity	0.74591237387473	bayes_pls_golite062009
cation:sugar symporter activity	0.143419068761182	bayes_pls_golite062009
sugar:hydrogen symporter activity	0.143419068761182	bayes_pls_golite062009
inorganic anion transmembrane transporter activity	0.05725800478022	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

[View Details]

Source: Reynolds et al. 2008. Manuscript submitted

Philius confidence legend

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