YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: TCP5_ARATH

General Information:
Name(s) found: TCP5_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
SHOW ALL
  • Transcription factor TCP5 OS=Arabidopsis thaliana GN=TCP5 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 360 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: cell differentiation [IGI]
    positive regulation of development, heterochronic [IGI]
    regulation of transcription [TAS]
    leaf morphogenesis [IGI]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSGECDEEE IQAKQERDQN QNHQVNLNHM LQQQQPSSVS SSRQWTSAFR NPRIVRVSRT  60
   61 FGGKDRHSKV CTVRGLRDRR IRLSVPTAIQ LYDLQDRLGL SQPSKVIDWL LEAAKDDVDK 120
  121 LPPLQFPHGF NQMYPNLIFG NSGFGESPSS TTSTTFPGTN LGFLENWDLG GSSRTRARLT 180
  181 DTTTTQRESF DLDKGKWIKN DENSNQDHQG FNTNHQQQFP LTNPYNNTSA YYNLGHLQQS 240
  241 LDQSGNNVTV AISNVAANNN NNLNLHPPSS SAGDGSQLFF GPTPPAMSSL FPTYPSFLGA 300
  301 SHHHHVVDGA GHLQLFSSNS NTASQQHMMP GNTSLIRPFH HLMSSNHDTD HHSSDNESDS 360
  361

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..194] MSA 93.255995 View MSA. No confident structure predictions are available.
    2 View Details [195..279] MSA 1.155991 View MSA. No confident structure predictions are available.
    3 View Details [280..360] deduced N/A Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle