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Protein Overview: gi|15231843, gi|...

General Information:
Name(s) found: gi|6729510 [NCBI NR]
gi|15231843 [NCBI NR]
gi|11346403 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|6729510|emb|CAB67666.1| receptor protein kinase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15231843|ref|NP_190927.1| leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] [NCBI NR]
  • pir||T45899 receptor protein kinase-like protein - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 783 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway [ISS]
    protein amino acid phosphorylation [IEA][ISS]
    Molecular Function: ATP binding [IEA][ISS]
    protein binding [IEA]
    protein kinase activity [IEA]
    protein serine/threonine kinase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWNNLTGRIP LEIGRISSLK LLLLNGNKFT GSLPPELGNL QNLNRLQVDE NNITGSVPFS  60
   61 FGNLRSIKHL HLNNNTISGE IPVELSKLPK LVHMILDNNN LTGTLPLELA QLPSLTILQL 120
  121 DNNNFEGSTI PEAYGHFSRL VKLSLRNCGL QGSIPDLSRI ENLSYLDLSW NHLTGTIPES 180
  181 KLSDNMTTIE LSYNHLTGSI PQSFSDLNSL QLLSLENNSL SGSVPTEIWQ DKSFENNKLQ 240
  241 VDLRNNNFSD ATGNLRTPDN NVKVSPGICL CTAPLSIDYR LKSPSFFFFT PYIERQFREY 300
  301 ITSSLQLETH QLAIDRLVDE NRLRPRMYLK LVPKGRITFN KSEVIRIRDR FMSWSFNKTD 360
  361 FFGPYELLDF PLQGPYGSVV AATVLSVTAT LLYVRKRREN SHTLTKKRVF RTISREIKGV 420
  421 KKFSFVELSD ATNGFDSSTL IGRGSYGKVY KGILSNKTEV AIKRGEETSL QSEKEFLNEI 480
  481 DLLSRLHHRN LVSLIGYSSD IGEQMLVYEY MPNGNVRDWL SVVLHCHAAN AADTLSFSMR 540
  541 SHVALGSAKG ILYLHTEANP PVIHRDIKTS NILLDCQLHA KVADFGLSRL APAFGEGDGE 600
  601 PAHVSTVVRG TPGYLDPEYF MTQQLTVRSD VYSFGVVLLE LLTGMHPFFE GTHIIREVLF 660
  661 LTELPRRSDN GVAKSVRTAN ECGTVLSVAD SRMGQCSPDK VKKLAELALW CCEDRPETRP 720
  721 PMSKVVKELE GICQSVREPE MFSETTKLLC SKTSPSSSSV PSPLSLLPGS NLDSGFFHAV 780
  781 KPR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..112] PSI-BLAST 16.522879 Polygalacturonase inhibiting protein PGIP
    2 View Details [113..411] FFAS03 5.91 Polygalacturonase inhibiting protein PGIP
    3 View Details [412..783] PSI-BLAST 69.045757 No description for 2qkwB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.45712316705811 bayes_pls_golite062009
  • protein kinase activity
    		•  1.15874168410175 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.07035565775811 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.04303056264156 bayes_pls_golite062009
  • kinase activity
    		•  1.01012392894161 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.972058696429347 bayes_pls_golite062009
  • protein binding
    		•  0.629660151009639 bayes_pls_golite062009
  • structural molecule activity
    		•  0.593913894584555 bayes_pls_golite062009
  • transferase activity
    		•  0.465842747614009 bayes_pls_golite062009
  • receptor activity
    		•  0.0692542433994829 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.76

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle