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Protein Overview: gi|6041792, gi|2...

General Information:
Name(s) found: gi|6041792 [NCBI NR]
gi|21779966 [NCBI NR]
Description(s) found:
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  • gi|6041792|gb|AAF02112.1|AC009755_5 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|21779966|gb|AAM77595.1|AF507018_1 auxin transport protein; BIG [Arabidopsis thaliana] [NCBI NR]
  • (Q9SRU2) F14P3.9 protein (Auxin transport protein) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|21779966|gb|AAM77595.1| auxin transport protein; BIG [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • auxin transport protein; BIG [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 5079 amino acids

    Gene Ontology:
    Cellular Component: membrane [IDA]
    Biological Process: root development [IMP]
    auxin polar transport [IDA]
    photomorphogenesis [IMP]
    indeterminate inflorescence morphogenesis [IMP]
    response to auxin stimulus [IMP]
    Molecular Function: ubiquitin-protein ligase activity [IEA]
    zinc ion binding [IEA]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADDLANLCR FLFDDTAFPS LSSSASSDLF SRRLRSDDSI KRGLRSFYLL LRWGVAPIGG  60
   61 DDADSSGKLR FETWSDSQLQ ALVSISQAIL LLSRSLLGTD LTLNQGLVDQ LEPIVLGVIQ 120
  121 EVMEFSLSFL EKSSFRQNDL KMEINMEILL EIASFDGSEK QYDILPDFSP AEVAELWPAF 180
  181 SGEHDNMDAQ SLVKCTFQGG RCSNEEKPVD RLLITLMSEC IESDVQAQSV VKSPFQQDCG 240
  241 DLNPFTRHLA VVHLRCVCRL IMVCKELVQL PNMLDEKTVD QAVLDKLSFC LRILKLLGSL 300
  301 SKDVQSIEND GSLLQAVASF TDAFPKLFRV FFEFTNHTAT EGNIESLSLA LVEGFLNLVQ 360
  361 LIFGKSSVFQ NVQACVAASI VSNLDSSVWR YDGSSCNLTP PLAYFPRSVI YTLKLIQDLK 420
  421 RQPYHIHDLR VLESEVTYED VSSTVDSVYF HLRQEKIPLL KCFTVEDIMR VIFPSSSQWM 480
  481 DNFFHLVYFL HREGVKLRPK VERTYSSLRS NSFAEVESQI SHDDEALFGN LFSEGSRSLC 540
  541 SIEPNDQPPV SVSSNLLLQA AKELLNFLRA CILCQEWVPS IYEDGCKKLD TGHIDILLNI 600
  601 VGCSIEDKAS DGGCMLQDEG RPGHVAFELL LNLLRSRALS DFLESYLFQQ ILVVENSDFN 660
  661 YNDKTLALLA HTLLCRPGLA GAQLRAKIYD GFVSFVTERA RGICAEALSL KELTACLPSA 720
  721 FHIEILLMAF HLSNEAEKAK FSNLIASCLH KVDTPAGICD GPQLSSWAML ISRLLVLLHH 780
  781 MLLHPNTCPT SLMLDLRSKL REVRSCGSNL HVTVGDHLSS WASLVARGIT DSWAEDESVS 840
  841 HLMSQMIDFS PHPPTFQNDV STAKTLNLDY GDLSASLCRV LGLWKGKKAG KVEDLLVERY 900
  901 IFMLSSDIAR INCALDSQPS LHVNYQNVDI SNSVDLISTS HLLVGDINVV GRNIELRNIL 960
  961 IGVLNQLQAA PEQVVEDLGW DYIREGAWLS LLLYFLDGGV WDYCNKNSCS EIDPFWKECT1020
 1021 SVDAKYVAAA EGVVSYLMKT GDIAELLRML SSLVGKYLRV YKKAFLATFS DWNHHGHSSP1080
 1081 SLLLLKHTQF GKSLQGEYAK IGDNSLHLQC IFYLSKLDSL GDGRGSGVLW KVFWEFMVHG1140
 1141 FPTSLQTSSA ILLSCILSIR CIVLTINGLL KLGNSKEKFG VDTSVLHQLL DSIMIIKFDQ1200
 1201 VFESFHGKCE EIHQNICAVL QLPDLTELFL MKDMEGFVRD ISAEQIDRSQ VLEGVITKIV1260
 1261 DVMDSLSKDS SKSDIFKFYL GVDAVSEHTR EFYELQRGDL SVFIDSLDYC SLEPVNIKVL1320
 1321 NFLVDLLSVA QSPDLRRRVQ QKFIDMDLIS LSGWLERRLL GSFVEEIDGK KTAKGNSLPF1380
 1381 REAAMNFINC LVSSTNDLQT RELQNHLFEA LLISLDTAFL SFDIHMSMSY FHFVLQLARE1440
 1441 DNLMKMVLKR TIMLMEKLAA EEKLLPGLKF IFGVIGTLLS NRSPSHGESL CGKSLASYKN1500
 1501 TATGPLVPKL SGTTKKSDTL ALPVDQEGSS ISLECDVTSV DEDEDDGTSD GEVASLDKED1560
 1561 EEDANSERYL ASKVCTFTSS GSNFMEQHWY FCYTCDLTVS KGCCSVCAKV CHRGHRVVYS1620
 1621 RSSRFFCDCG AGGVRGSSCQ CLKPRKYNGN GSAPARGTNN FQSFLPLSED ADQLGESDSD1680
 1681 VEEDGFGEEN HVVLYIPKET QYKMSLLLEE LGIEDRVLEL FSSLLPSITS KRDSGLSKEK1740
 1741 QVNLGKDKVL SFDTDLLQLK KAYKSGSLDL KIKADYTNSK DLKSLLANGS LVKSLLSVSV1800
 1801 RGRLAVGEGD KVAIFDVGQL IGQATIAPIN ADKANVKPLS RNIVRFEIVH LSFNPVVENY1860
 1861 LAVAGLEDCQ ILTLNHRGEV IDRLAVELAL QGAFIRRIDW VPGSQVQLMV VTNKFVKIYD1920
 1921 LSQDSISPTQ YFTLPNDMIV DATLFVASRG RVFLLVLSEQ GNLYRFELSW GGNAGATPLK1980
 1981 EIVQIMGKDV TGKGSSVYFS PTYRLLFISY HDGSSFMGRL SSDATSLTDT SGMFEEESDC2040
 2041 KQRVAGLHRW KELLAGSGLF ICFSSVKSNA VLAVSLRGDG VCAQNLRHPT GSSSPMVGIT2100
 2101 AYKPLSKDNV HCLVLHDDGS LQIYSHVRSG VDTDSNFTAE KVKKLGSKIL NNKTYAGAKP2160
 2161 EFPLDFFERA FCITADVRLG SDAIRNGDSE GAKQSLASED GFIESPSPVG FKISVSNPNP2220
 2221 DIVMVGIRMH VGTTSASSIP SEVTIFQRSI KMDEGMRCWY DIPFTVAESL LADEDVVISV2280
 2281 GPTTSGTALP RIDSLEVYGR AKDEFGWKEK MDAVLDMEAR VLGHGLLLPG SSKKRALAQS2340
 2341 ASMEEQVIAD GLKLLSIYYS VCRPRQEVVL SELKCKQLLE TIFESDRETL LQTTACRVLQ2400
 2401 SVFPRKEIYY QVMFLPNSVK DTMRLLGVVK VTSILSSRLG ILGTGGSIVE EFNAQMRAVS2460
 2461 KVALTRKSNF SVFLEMNGSE VVDNLMQVLW GILESEPLDT PTMNNVVMSS VELIYSYAEC2520
 2521 LASQGKDTGV HSVAPAVQLL KALMLFPNES VQTSSRCVLV LAISSRLLQV PFPKQTMLTT2580
 2581 DDLVDNVTTP SVPIRTAGGN THVMIEEDSI TSSVQYCCDG CSTVPILRRR WHCTVCPDFD2640
 2641 LCEACYEVLD ADRLPPPHTR DHPMTAIPIE VESLGADTNE IQFSADEVGI SNMLPVVTSS2700
 2701 IPQASTPSIH VLEPGESAEF SASLTDPISI SASKRAVNSL ILSEFLQELS GWMETVSGVQ2760
 2761 AIPVMQLFYR LSSAIGGAFM DSSKPEEISL DKLIKWLLGE INLSKPFAAS TRSSLGEIVI2820
 2821 LVFMFFTLML RSWHQPGSDG SSSKLGGSTD VHDRRIVQSS TVVATQSSLH VQERDDFASQ2880
 2881 LVRACSCLRN QEFVNYLMNI LQQLVHVFKS RAANVEARGS SSGSGCGAML TVRRDLPAGN2940
 2941 YSPFFSDSYA KAHRADIFVD YHRLLLENVF RLVYTLVRPE KQEKMGEKEK VYRNASSKDL3000
 3001 KLDGFQDVLC SYINNPHTAF VRRYARRLFL HLCGSKTQYY SVRDSWQFSN EVKNLYKHVE3060
 3061 KSGGFENNVS YERSVKIVKS LSTIAEVAVA RPRNWQKYCL RHGDFLSFLL NGVFHFAEES3120
 3121 VIQTLKLLNL AFYQGKDVSS SVQKAEATEV VTGSNRSGSQ SVDSKKKKKG EDGHDSGLEK3180
 3181 LYVDMEGVVD IFSANCGDLL RQFIDFFLLE WNSSSVRTEA KSVIYGLWHH GRHSFKESLL3240
 3241 AALLQKVRYL PAYGQNIVEY TELVSLLLDK APENNSKQAI NELVDRCLNP DVIRCFFETL3300
 3301 HSQNELIANH PNSRIYSTLG NLVEFDGYYL ESEPCVACSS PDVPYSKMKL ESLKSETKFT3360
 3361 DNRIIVKCTG SYTIQSVTMN VHDARKSKSV KVLNLYYNNR PVSDLSELKN NWSLWKRAKS3420
 3421 CHLSFNQTEL KVEFPIPITA CNFMIELDSF YENLQALSLE PLQCPRCSRP VTDKHGICSN3480
 3481 CHENAYQCRQ CRNINYENLD SFLCNECGYS KYGRFEFNFM AKPSFIFDNM ENDEDMKKGL3540
 3541 AAIESESENA HKRYQQLLGF KKPLLKIVSS IGETEMDSQH KDTVQQMMAS LPGPSCKINR3600
 3601 KIALLGVLYG EKCKAAFDSV SKSVQTLQGL RRVLMSYLHQ KNSNFSSGAS RCVVSKTPNN3660
 3661 CYGCATTFVT QCLEILQVLS KHPRSRKQLV AAGILSELFE NNIHQGPKTA RAQARAALST3720
 3721 FSEGDLSAVN ELNNLVQKKI MYCLEHHRSM DIALATREEM LLLSEVCSLT DEFWESRLRL3780
 3781 VFQLLFSSIK LGAKHPAISE HIILPCLKII SVACTPPKPD TAEKEQTMGK SAPAVQEKDE3840
 3841 NAAGVIKYSS ESEENNLNVS QKTRDIQLVS YLEWEKGASY LDFVRRQYKA SQSIRGASQK3900
 3901 SRTHRSDFLA LKYTLRWKRR SSRTSKGGLQ AFELGSWVTE LILSACSQSI RSEMCTLISL3960
 3961 LAAQSSPRRY RLINLLIGLL PATLAAGESS AEYFELLFKM IETQDALLFL TVRGCLTTIC4020
 4021 KLISQEVGNI ESLERSLQID ISQGFTLHKL LELLGKFLEV PNIRSRFMRD NLLSHVLEAL4080
 4081 IVIRGLIVQK TKLINDCNRR LKDLLDGLLL ESSENKRQFI RACVSGLQTH AEENKGRTCL4140
 4141 FILEQLCNLI CPSKPEAVYM LILNKSHTQE EFIRGSMTKN PYSSAEIGPL MRDVKNKICQ4200
 4201 QLDLLGLLED DYGMELLVAG NIISLDLSIA QVYELVWKKS NQDCPPMTVT YRLQGLDGEA4260
 4261 TEPMIKELEE DREESQDPEI EFAIAGAVRE YGGLEILLDM IKSLQDDFKS NQEEMVAVLD4320
 4321 LLNHCCKIRE NRRALLRLGA LSLLLETARR AFSVDAMEPA EGILLIVESL TLEANESDSI4380
 4381 SAAQSALTVS NEETGTWEQA KKIVLMFLER LSHPSGLKKS NKQQRNTEMV ARILPYLTYG4440
 4441 EPAAMEALIE HFSPYLQNWS EFDQLQQRHE EDPKDDSIAQ QAAKQRFTVE NFVRVSESLK4500
 4501 TSSCGERLKD IVLENGIIAV AVKHIKEIFA ITGQTGFKSS KEWLLALKLP SVPLILSMLR4560
 4561 GLSMGHLPTQ TCIDEGGILT LLHALEGVSG ENDIGARAEN LLDTLADKEG KGDGFLGEKV4620
 4621 RALRDATKDE MRRRALRKRE ELLQGLGMRQ ELSSDGGERI VVSQPILEGF EDVEEEEDGL4680
 4681 ACMVCREGYK LRPSDLLGVY SYSKRVNLGV GNSGSARGEC VYTTVSYFNI IHFQCHQEAK4740
 4741 RADAALKNPK KEWEGAMLRN NESLCNSLFP VKGPSVPLAQ YLRYVDQYWD NLNALGRADG4800
 4801 SRLRLLTYDI VLMLARFATG ASFSADCRGG GRDSNSRFLP FMFQMARHLL DQGGPVQRTN4860
 4861 MARSVSSYIS SSSTSTATAP SSDSRPLTPG SQLSSTGTEE TVQFMMVNSL LSESYESWLQ4920
 4921 HRRVFLQRGI YHTFMQHAHG RVASRAAEPT SSGGKTQDAE TLTGDELLSI VKPMLVYTGM4980
 4981 IEQLQQLFKP KKPVHIEPIK KEGTSSGVEL EPWEIVMKEK LLNVKEMIGF SKELISWLDE5040
 5041 INSATDLQEA FDIVGVLADV LSEGVTQCDQ FVRSAIDKD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.53

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle