YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: GAT29_ARATH

General Information:
Name(s) found: GAT29_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|9294402|dbj|BAB02483.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|71660799|sp|Q9LT45.1|GAT18_ARATH RecName: Full=Putative GATA transcription factor 18 [NCBI NR]
  • gi|225898665|dbj|BAH30463.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15232346|ref|NP_188711.1| zinc finger (GATA type) family protein [Arabidopsis thaliana] [NCBI NR]
  • GATA transcription factor 29 OS=Arabidopsis thaliana GN=GATA29 PE=2 SV=1 [Swiss-Prot]
  • Putative GATA transcription factor 18 OS=Arabidopsis thaliana GN=At3g20750 PE=3 SV=1 [Swiss-Prot]
  • (Q9LT45) Emb|CAB16831.1 [athaliana3702.FASTAC.txt]
  • unnamed protein product [Arabidopsis thaliana]gi|15232346|ref|NP_188711.1| zinc finger (GATA type) family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Putative GATA transcription factor 18 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | zinc finger (GATA type) family protein | chr3:7255022-7256146 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Putative GATA transcription factor 18 [nr-271106-contam.fasta]
  • | Symbols: GATA29 | GATA transcription factor 29 | chr3:7255016-7256140 FORWARD LENGTH=208 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 208 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: regulation of transcription, DNA-dependent [IEA]
    Molecular Function: transcription factor activity [IEA][ISS]
    zinc ion binding [IEA]
    sequence-specific DNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPELDLTLK LGLPNSTVET HLTLSPPTTT TDQGTNVVDG GEVINHRRGL LGDDEVIHNE  60
   61 PTRNNVEFNI RIYNYVFQQF VGAPNTLNFA PYPMPPSPAP APETPPVSDE YVLIDVPARR 120
  121 ARRNNSTVMT NSWKENATPK RIRGCGGFCG GRIEGMKKCT NMNCNALNTP MWRRGPLGPK 180
  181 SLCNACGIKF RKEEERKAKR NVVIVLDD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..128] MSA 6.259996 View MSA. No confident structure predictions are available.
    2 View Details [129..208] PSI-BLAST 12.522879 Erythroid transcription factor GATA-1


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle