YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|20197720, gi|...

General Information:
Name(s) found: gi|20197720 [NCBI NR]
gi|18399619 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|20197720|gb|AAD29797.2| putative ER lumen protein retaining receptor [Arabidopsis thaliana] [NCBI NR]
  • gi|18399619|ref|NP_565501.1| ER lumen protein retaining receptor family protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9SKP4) Putative ER lumen protein retaining receptor [athaliana3702.FASTAC.txt]
  • putative ER lumen protein retaining receptor [Arabidopsis thaliana]gi|18399619|ref|NP_565501.1| ER lumen protein retaining receptor family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 ER lumen protein retaining receptor family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | ER lumen protein retaining receptor family protein | chr2:9087997-9089723 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative ER lumen protein retaining receptor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • receptor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | ER lumen protein retaining receptor family protein | chr2:9080916-9082642 FORWARD LENGTH=269 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Putative ER lumen protein retaining receptor OS=Arabidopsis thaliana GN=At2g21190 PE=4 SV=2 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 269 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA][ISS]
    Biological Process: protein transport [ISS]
    protein retention in ER lumen [IEA]
    Molecular Function: ER retention sequence binding [IEA]
    receptor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTPIHAVST WVRRQPPKVK AFLAVVSGMA ALVLLKLIVH DHDNLFVAAE AVHSIGISVL  60
   61 IYKLMKEKTC AGLSLKSQEL TAIFLAVRLY CSFVMEYDIH TILDLATLGT TLWVIYMIRF 120
  121 NLKTTYMEEK DNFALYYVLA PCVVLAVWIH PSTSHNILNR ISWGFCVYLE AVSVLPQLRV 180
  181 MQNTKIVEPF TAHYVFALGV ARFFSCAHWV LQMMDTHGRL LVVLGYGLWP SMVIISEIVQ 240
  241 TFILADFCYY YVKSVFGGQL VLRLPSGVV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..155] MSA 4.054974 View MSA. No confident structure predictions are available.
    2 View Details [156..269] MSA 3.054985 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle